| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2086 |
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| Symbol | |
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| ID | 3917734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 2223045 |
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| End bp | 2225045 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640444839 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_497359 |
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| Protein GI | 87200102 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0442115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACG ACCTTTTCGA CAAGCTCCCC GCCACCAGCG CCGCCGAAGC CTATGACGGT
TCCGCGATCG AGGTTCTCGA AGGCCTCGAA CCGGTCCGCC GCCGCCCCGG CATGTACATC
GGCGGCACGG ACGAACGCGC GCTGCACCAC CTCGCCGCAG AAGTGCTCGA TAACGCGATG
GACGAAGCGG TCGCTGGCCA CGCCAACCGC ATCGAGGTCC TGCTCGAGGA AGGCAACCGG
CTGACCATCT CCGACAACGG TCGCGGCATC CCGGTCGACG AACATCCCAA GTATCCGGGC
AAGTCGGCAC TCGAAGTGAT CCTCACCACG CTCCACTCGG GTGGCAAGTT CTCGGGCAAG
GCCTATGCAA CCTCGGGCGG CCTCCACGGC GTCGGCGTCT CGGTCGTCAA CGCGCTGTCC
TCGCTCACCC GCGTCGAAGT AGCCCGCAAC AAGGAACTCT ACGCGCAGGA ATTTTCGCGC
GGGAACCCGA CGACGAAGCT GATGAAGGTC GGCAACGCCC CCAACCGGCG CGGCACCCAG
GTCACCTTCA TCCCCGACAC CGAGATCTTC GGAGAGGACG CGAAGTTCAA GCCTGCGCGC
CTGTTCCGGC TGGTCCGCTC CAAGGCCTAC CTCTTCGCCG GCGTCGAGAT CCGCTGGAAG
TGCGAGCCCT CGCTCGCCAG CGACGACGTG CCCGCCGAAG CCGTGTTCCA GTTCCCCGGC
GGCCTGGCCG ATCATCTGGC CGAACAGGTC TCGGGCCGCG AATGCGTCAC TTCGGTCCCC
TTCGCGGGTC GCCAGGATTT CCCGCTCGGT CCCGATGGCG AGGAAATGGG CCGCGTCGAA
TGGGCGATTG CCTGGCCGCT GTGGTCCGAC GGCTCCTACT CGTGGTACTG CAATACCATT
CCCACGCCCG ATGGCGGCAC CCATGAACAG GGCCTGCGCG CGGCACTGAC CAAGGGCATC
CGCGCCTTCG CGGACCTCAT CGGCCAGAAA AAGGCCAAGG ACATCGCGCC GGAAGACATG
ATCACCGGCA GCGAGATCAT GCTCTCGGTC TTCATCCGCG ATCCCCAGTT CCAGAGCCAG
ACCAAGGACC GCCTGACCAG CCCCGAAGCC GCGCGCATGG TCGAGGCCGC CGTGCGCGAC
CATTTCGACC ACTTCCTCAC CGACAACATG GAGCGCGGCA AGGCCCTGCT CGGCGCGGTG
ATGGAGCGCA TGGACGAACG CCTGCGCCGC AAGGCGGAGC GTGAGGTCAA GCGCAAGACC
GCGACCAACG CCCGCAAGCT GCGCCTCCCC GGCAAGCTCA CCGACTGCTC GGGCGAAGGC
AGCGGAGAGA CCGAACTGTT CATCGTCGAA GGCGATTCGG CAGGCGGCAG CGCCAAGCAG
GCACGCGACC GCAAGACCCA GGCGATCCTG CCGATCCGCG GCAAGATCCT CAACGTCGCA
AGCGCCACCG CCGACAAGAT CCGCGCCAAC CAGGAAATCG CCGACCTCGC GCTCGCACTC
GGCTGCGGCA TGCGCAAGGA CTGCAATCCC GATGCTCTAC GCTATGACCG CGTCATCATC
ATGACCGACG CCGACGTCGA CGGCGCACAC ATCGCCACGC TGCTGATGAC GTTCTTCTTC
CAGGAGATGC CCGAGCTCGT CAGGCGCGGT CATCTCTACC TCGCCCAGCC GCCGCTCTAC
CGCCTGACCA GCGGCAGCAC GTCGGCCTAC GCCAAGGACG ACGCCCACCG CGCCGAACTC
GAAGCCACGA AGTTCAAGGG CAAGAAGGTC GAAGTCGGGC GCTTCAAGGG CCTCGGCGAA
ATGAACCCTC AGCAGTTGCG CGAAACAACC ATGGCGCCTG CCACCCGCAG CCTCATCCGC
ATCACCCTGC CGCCCGAGTA CGAAGGCCGC GCGGCAGTGA AGGACCTGGT CGACAGGCTG
ATGGGCCGCG ACCCGGCACA ACGCTTCATG TTCATCCAGA ACCGCGCGAG CGAGATCGAT
CCGGAACTGA TCGACGCGTG A
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| Protein sequence | MSDDLFDKLP ATSAAEAYDG SAIEVLEGLE PVRRRPGMYI GGTDERALHH LAAEVLDNAM
DEAVAGHANR IEVLLEEGNR LTISDNGRGI PVDEHPKYPG KSALEVILTT LHSGGKFSGK
AYATSGGLHG VGVSVVNALS SLTRVEVARN KELYAQEFSR GNPTTKLMKV GNAPNRRGTQ
VTFIPDTEIF GEDAKFKPAR LFRLVRSKAY LFAGVEIRWK CEPSLASDDV PAEAVFQFPG
GLADHLAEQV SGRECVTSVP FAGRQDFPLG PDGEEMGRVE WAIAWPLWSD GSYSWYCNTI
PTPDGGTHEQ GLRAALTKGI RAFADLIGQK KAKDIAPEDM ITGSEIMLSV FIRDPQFQSQ
TKDRLTSPEA ARMVEAAVRD HFDHFLTDNM ERGKALLGAV MERMDERLRR KAEREVKRKT
ATNARKLRLP GKLTDCSGEG SGETELFIVE GDSAGGSAKQ ARDRKTQAIL PIRGKILNVA
SATADKIRAN QEIADLALAL GCGMRKDCNP DALRYDRVII MTDADVDGAH IATLLMTFFF
QEMPELVRRG HLYLAQPPLY RLTSGSTSAY AKDDAHRAEL EATKFKGKKV EVGRFKGLGE
MNPQQLRETT MAPATRSLIR ITLPPEYEGR AAVKDLVDRL MGRDPAQRFM FIQNRASEID
PELIDA
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