| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1968 |
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| Symbol | |
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| ID | 3917284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2085758 |
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| End bp | 2087725 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640444716 |
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| Product | transketolase |
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| Protein accession | YP_497242 |
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| Protein GI | 87199985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00341468 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGCG AAACCACCGC GCTGGCGCCC ATGGCCAACG CGATCCGTGC GCTTGCCATG
GACGCGGTCC AGGCAGCGAA TTCGGGACAC CCTGGCATGC CGATGGGCAT GGCCGATGTC
GCGACGGTGC TGTGGACGCA GTTTCTGAAG CACGATCCCG CCGCGCCGAA GTGGTCGGAT
CGGGACCGCT TCATTCTGTC GGCCGGCCAC GGCTCCATGC TGATCTACGC GCTGCTTCAC
CTGTCGGGCT ACGAAAGCCC GACGATGGAC GACATCCGCA AGTTCCGCCA GCTCGACAGC
GTCTGCGCCG GTCACCCCGA GAACTTCCTT ATTCCCGGCG TTGAATGCAC CACCGGTCCG
CTCGGGCAGG GGCTTGCCAT GGCAGTCGGC TTCGCAATGG CCGAACGCCA TCTTAATGCC
CAGTTCGGCA GCGACCTGGT CGACCACAAG ACGTGGGTCA TTGCTGGCGA CGGCTGCCTC
ATGGAAGGCA TCAACCACGA AGCGGTCGGC CTTGCAGGCA CACTCAAGCT TGGTCGCCTC
AACGTGCTGT GGGACGACAA CAAGATTACC ATTGACGGTG ACACATCGCT TTCGACAAGC
GAGGACATTC TTGGCCGGTA TGCCGCGTCG GGTTGGCACG TCACCTCGTG CGACGGCCAT
GATTTTGCAG ACATCGCACG CGCGCTGGCA GAAGCACAGG CCGATCCGCG CCCGTCGCTT
GTTGCCTGCC GCACCGTGAT CGGAAAGGGT GCGCCCAACA AGCAGGGCGG GCACAACGTC
CATGGCGCAC CGCTCGGTGC GGACGAGATC GCTGCCGCGC GTGAGTATCT TGGCTGGACC
GCGGCTCCGT TCGAAGTCCC GGCCGACATC CTCGCCAACT GGCGCTCCTC GGCAGAAGCC
GGAAAGACCG CGCGAGCCGA ATGGGAAAAG CGGGCTGCAG CCAATCCCAA TGCCGCCGAA
CTGGCCCGCC GCATGGCCGG GGAACTCCCC GCCCAGACCG GTTTCGACGC CTATATCCAG
TCGCTGATCG CCAGCCCGCC CAAGGTCGCC ACCCGCAAGT CGAGCGAGAT GGCTCTCGAG
GCCTTCACCG CGAACGTGCC CGAGATGGTG GGTGGTTCGG CTGACCTCAC CGGCTCGAAC
AACACGAAGA CAAAGTCGAC CGCGCCGTTC ACGCCGGAAA GCTATGACGG ACGCTACGTC
TACTACGGCA TCCGCGAATT CGGCATGGCT GCCGCGATGA ACGGCATGGC GCTGCATGGC
GGGATCATCC CGTATGGCGG CACGTTCCTC GTGTTCTCCG ACTACTGTCG CAACGCCGTG
CGCATGTCTG CGCTCCAGCA CGTGCGAGCG ATCTATGTGT TCACTCACGA TTCGATCGGC
CTTGGCGAAG ACGGCCCGAC CCATCAGCCG GTCGAGCATG TCATGTCGCT GCGCATGATC
CCGAACCTGC TGGTATTCCG TCCTGCGGAT GCCATCGAGA CCGCTGAAGC GTGGGCTATC
GCGCTTGCAA ACAAGGACCG TCCGTCGGTC CTCGCGCTGA CCCGCCAAAA TCTGCCGCCG
GTCCGCTTCG ACGCCGAGAT GAAGAGCGCA AAGGGCGCCT ATCGCCTTGT TGCCGCGCAG
GCCGACCGCA AGGTTGTGCT GCTGGCTACC GGTTCGGAAG TGGAAGTCGC GATCAAGGTC
GCGGCCGAAC TGGAAGCCAA GGGTCTGGGC GCCGACGTCG TTTCGGTTCC ATGCTGGGAA
CTGTTCGACG AACAGGACGC GGCCTACAAG GCTGACCTGC TGCCCGCCGA CGCACTCAAG
GTCTCGGTGG AGGCAGGCGT GACTCTGGGG TGGCAGAAGT ACATCGGCGA TGGCCTGGCC
ATCGGCATCG ACACGTTCGG CGCGTCGGCC CCGGCCGAAG TGCTGTTCGA CCACTTTGGC
CTCACGGCTG AAAAGATTGT CCCGCAGATT CTCGCGCGGG TTTCGTAA
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| Protein sequence | MTRETTALAP MANAIRALAM DAVQAANSGH PGMPMGMADV ATVLWTQFLK HDPAAPKWSD
RDRFILSAGH GSMLIYALLH LSGYESPTMD DIRKFRQLDS VCAGHPENFL IPGVECTTGP
LGQGLAMAVG FAMAERHLNA QFGSDLVDHK TWVIAGDGCL MEGINHEAVG LAGTLKLGRL
NVLWDDNKIT IDGDTSLSTS EDILGRYAAS GWHVTSCDGH DFADIARALA EAQADPRPSL
VACRTVIGKG APNKQGGHNV HGAPLGADEI AAAREYLGWT AAPFEVPADI LANWRSSAEA
GKTARAEWEK RAAANPNAAE LARRMAGELP AQTGFDAYIQ SLIASPPKVA TRKSSEMALE
AFTANVPEMV GGSADLTGSN NTKTKSTAPF TPESYDGRYV YYGIREFGMA AAMNGMALHG
GIIPYGGTFL VFSDYCRNAV RMSALQHVRA IYVFTHDSIG LGEDGPTHQP VEHVMSLRMI
PNLLVFRPAD AIETAEAWAI ALANKDRPSV LALTRQNLPP VRFDAEMKSA KGAYRLVAAQ
ADRKVVLLAT GSEVEVAIKV AAELEAKGLG ADVVSVPCWE LFDEQDAAYK ADLLPADALK
VSVEAGVTLG WQKYIGDGLA IGIDTFGASA PAEVLFDHFG LTAEKIVPQI LARVS
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