Gene Saro_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1952 
Symbol 
ID3917267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2070281 
End bp2071351 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content65% 
IMG OID640444699 
Productalanine racemase 
Protein accessionYP_497226 
Protein GI87199969 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACA TTTCCCTTCC GACGACGCCC GACCTGCCCG AGTCCTCCCT TCGCCTGCGG 
ATCGATGCCG ATGCGCTTGC GTCTAACTGG CGCGCACTCG ACGCGATGTC GGGCACGGCG
ACCGCCGGCG CTGCAGTAAA GGCTGATGCC TATGGACTGG GCGCTGCGCG TGTCTCGCGC
ATCCTTGTCG GCGCGGGTTG TCGCGACTTC TTCGTCGCGC ATTGGGCGGA AGTGCCGAAC
CTCCTGCCGC ATGTCCCCGC AGCCAGCATC GCCGTGCTGC ATGGTCCCAT GAATGCGGCG
GAAGCCGCCT TCGCTCGGGC AACTGGTGCA AGGCCAGTTC TGAACAGCCT GTCGCAGGCC
CGTCTCTGGC AGGAAACAGG CGGCGGACGG TGCCACGTCA TGGTCGATAC CGGAATGAGT
CGACTTGGCC TCGCCATGTC CGAGATCGCC GATCCAGCGC TGGCTGACCT CGATGTGGAC
CTTTGCCTCA GCCACCTCGC AAGTGCGGAT GAGGATGTTC CGCAGAACGA GCAACAGCGC
CTTCGCTTCG AAACGGTCCG CGCCGCCATT CCCGCCCGTC GCTACAGCCT TGCCAACAGC
GCCGGCATAG CGCTCGGTGC GGGCTTCCAC GCGGACGTCA CTCGCCCGGG CATCGCTCTC
TATGGCGGCA TCGCCAGGCC CGAATTTGCC GGCACGATCC GCCAGGTCGC GCGTCCCGAA
GCAGCGGTCA TCCAGGTCCG CCATCTCCAA CCAGGCGACA AAGTCGGCTA CAATGCGATC
TTTACCGCTG ATCGCCCGAT GCGGGTCGGC GTTCTCGCGA TCGGCTATGC CGACGGCTAT
CTTCGCTGCT GGACCGGGCG GGGTAGCTTC CTGTTCGATG GAGTCGAAGT ACCCGTCCTC
GGCCGGGTGT CTATGGACCT CACCATCGTC GACCTTGGCG GAGTCCCGTC ATGCAACGAG
GGGGATTGGC TGGTCGCATC CTACGACTTG CCGCGCGCAG CGCGCGAAAG CGGCCTTTCG
CAGTACGAAC TGCTTACGGT GCTGGGGCGT AGATTTTCCC GCCGGAATTG A
 
Protein sequence
MTDISLPTTP DLPESSLRLR IDADALASNW RALDAMSGTA TAGAAVKADA YGLGAARVSR 
ILVGAGCRDF FVAHWAEVPN LLPHVPAASI AVLHGPMNAA EAAFARATGA RPVLNSLSQA
RLWQETGGGR CHVMVDTGMS RLGLAMSEIA DPALADLDVD LCLSHLASAD EDVPQNEQQR
LRFETVRAAI PARRYSLANS AGIALGAGFH ADVTRPGIAL YGGIARPEFA GTIRQVARPE
AAVIQVRHLQ PGDKVGYNAI FTADRPMRVG VLAIGYADGY LRCWTGRGSF LFDGVEVPVL
GRVSMDLTIV DLGGVPSCNE GDWLVASYDL PRAARESGLS QYELLTVLGR RFSRRN