Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1929 |
Symbol | |
ID | 3917152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2041595 |
End bp | 2043823 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640444675 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_497203 |
Protein GI | 87199946 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCGCA CACCTTCAGT TCCGGTTCGC CGATTGCCGC GGTGGTGGCG CCGCGTACTC GTCAGCCTGC GCCGTGCGAA CGTCTTCCTT CTTCTGGAGA TCGCGGCATC CGCAGTTCTT GCTCTGATGC TTGCAGTGAG CTGGCTAACG CTCACGTCTT CCAGCGCCGA GGGGCAAATT CTTCCATCGC GCCTGACCTC GAGCCTGCTC ATCGGCACCT TGGTTCCGGC TATGGCCCTG ATAATCCTGG TCGGTCGCCG TCTCGCAATT CGGCGTGCCG CGCAGAGCGT TCTGGGGTCG AGCGGCCGGC TGCACGTCCG CCTTGTGTGG CTATTCTCGC TCATCGCCGC GATCCCGACT TTGCTTGTCG TGGTATTTGC CTCGTTCCTT TTCCAGTCCG GCGTGGAGTT CTGGTTCTCC GACAATTCGC GCGGAATGCT CGAGAATGCG AACAAGCTTG CGCGCGGATA TTACGAGGAC AAGTTGCGCG ATGTCGGCAA CGAGACCGTG GCCATGGCTG GCGACATCAG GGACTACCTG GATCAGGCCG CCATCACCTC GACCGAATTT GCAGAAGGCT ATTCGTTCCA GGTTCTTAGC CGCCAACTCA ACGAATCCGC CATCCTCGAA CGCGCACCGG ATGGTTCGCT CCGCACGGCA GCCATCGTCG ACCCGGAAAA GTCCGACCGC CGTCAGCGTG TCACTCCGCA GGACCTGAAG CGCCTCGACG CGGGCGAAAG CGTGGTCGTG AGCGCCTCTG CGCAACGCAT CGAAGCCGTT ACCCCGGTCG ATAAACGGCG CGGCATCTAT CTCTACGCCG CCCGTACATC GGATGCCCTC GCACTCGAAC AGTGGGAGCG CGCTCAGACT GTCCTCAAGG CCTATGACAT GCTGACGACG CGGGCGAGGG CGCTGCAATT GCGCTTTAAT CTCGCGCTGT TCGGCGTCAG CCTGGCGCTC GTCGGCCTCG CGGTCTGGGC GGCGTTGCGC TTTGCCGACC GCCAGGTCGC TCCGCTGGCC GAACTCGTCT CAGCGGCCCG CACGATCGGA AGCGGCAACT TCGCCATGCG CGTCGCGCAG AACAGCGGCA CCGACGAAAT CGGCCTGCTC GCGCGTGCCT TCAACCGCAT GACCCAGCAG CTTGAGGGCC AGACCCAGGC GCTTGTCTCG GCCAACGCAC AGCTAGAGGT GCGCCGCGCC TTTATCGAAG CCGTACTGGA ATCGATCACG GCAGGCATCG TCTCGATCGG CCGCGACGGA GCGATCCAGC TCATCAATTC GTCCGCGCAG CGACTGCTTC TGGATACAGA CGCTGCAAGC CCCATTGGCC GCGCTCTTTC CGATGTTTCG CCGGTCTTTG CCCAACTCGT TGCGTCGGGC CAACCCAACA ACGTGATCCA GCATCCCCTC GGTGGTGATC TGCGCACGCT CGCCGTGCGC GTGGTGGAAG ACAACAACGG CCACGTCATC ACTTTCGAGG ACATTACCCG ACAGCTTCTC GACCAGCGCC GTGCGGCCTG GTCCGACGTG GCGCGCCGTA TCGCGCACGA GATCAAGAAC CCGTTGACCC CGATCCAGCT CGCGACCGAA CGTCTCAAGC GCCGCTACGG GCGCCAGATC GAGAATGACC CGGAACTGTT CGAGGAGTTG ACGAGCACGA TCATCCGCCA GGTCGGAGAC CTCCGGAAGA TGGTCGACGA GTTTTCCTCG TTCGCGCGAC TGCCTAAGCC GGTGTTCCGG GCCGAGGATG CCAGCGACCT GGTCCGCCAG TCGCTGTTCC TCCAGGAAGT TGCGCATACC GCCATCGATT TCAGCTTCGC ATGCGACGCG CCGTCCATGC CCATCCAGTG CGACCGCCAC CAGTTCGCAC AAGTCATGAC CAACGTCCTC AAGAACGCCG TCGAGGCGAT CGAGGCCAAA GCCAAGACCG AGGACGTCGA TTATCGCGGT CGCATAGCTG TGACCCTTGC CGGCGATCAC GATACCGTGA CGGTCAGCGT CACTGACAAC GGCATCGGCC TTCCTGCCGA ACGCGAACGC ATACTCGAAC CGTACATGAC GACGCGCGAA AAGGGCACTG GCCTCGGTCT GGCGATCGTT CACAAGATCG TCGAGGAGCA CGGCGGCGAG ATGGCCTTCA CCGCCGAGCC CGGCGGCGGC ACCCGCGTAA CAATGCGCTT CGCCCGCGAT CCGCTTGCAA CTTCCGCCCA CCACGCCGAA CAGGACTGA
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Protein sequence | MERTPSVPVR RLPRWWRRVL VSLRRANVFL LLEIAASAVL ALMLAVSWLT LTSSSAEGQI LPSRLTSSLL IGTLVPAMAL IILVGRRLAI RRAAQSVLGS SGRLHVRLVW LFSLIAAIPT LLVVVFASFL FQSGVEFWFS DNSRGMLENA NKLARGYYED KLRDVGNETV AMAGDIRDYL DQAAITSTEF AEGYSFQVLS RQLNESAILE RAPDGSLRTA AIVDPEKSDR RQRVTPQDLK RLDAGESVVV SASAQRIEAV TPVDKRRGIY LYAARTSDAL ALEQWERAQT VLKAYDMLTT RARALQLRFN LALFGVSLAL VGLAVWAALR FADRQVAPLA ELVSAARTIG SGNFAMRVAQ NSGTDEIGLL ARAFNRMTQQ LEGQTQALVS ANAQLEVRRA FIEAVLESIT AGIVSIGRDG AIQLINSSAQ RLLLDTDAAS PIGRALSDVS PVFAQLVASG QPNNVIQHPL GGDLRTLAVR VVEDNNGHVI TFEDITRQLL DQRRAAWSDV ARRIAHEIKN PLTPIQLATE RLKRRYGRQI ENDPELFEEL TSTIIRQVGD LRKMVDEFSS FARLPKPVFR AEDASDLVRQ SLFLQEVAHT AIDFSFACDA PSMPIQCDRH QFAQVMTNVL KNAVEAIEAK AKTEDVDYRG RIAVTLAGDH DTVTVSVTDN GIGLPAERER ILEPYMTTRE KGTGLGLAIV HKIVEEHGGE MAFTAEPGGG TRVTMRFARD PLATSAHHAE QD
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