Gene Saro_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1907 
Symbol 
ID3917128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2019395 
End bp2019844 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content60% 
IMG OID640444651 
ProductNUDIX hydrolase 
Protein accessionYP_497181 
Protein GI87199924 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.397506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA ATTCGACAGT GATAGTGGTC GTGGCGGTTG CGCTGGTGGG ACAAGGGCCA 
AGGGTGCTCA TGCAGAAGCG TCCCGCAAAC AAGGCGCATG GCGGGCTTTG GGAGTTCCCC
GGCGGCAAGG TCGAGATGGG GGAAACGCCT GAATCCGCGC TTGTAAGAGA AACCGACGAG
GAGCTGGGCG TGGCCCTCGA ACCGGCCGAT CTCGAACCAC TTTCCTTTGC AACACAAGCT
CTTGGTAGTG CCGGGGGCTC CATGGTCCTG CTGCTGTACC GGGCTCGCAA ATGGCGCGGT
GATCCAAAGG CGCTCGAACC GGACACGGAG GTGGCCTGGG TAGACTTCAG CGCGCTCCTG
GACCTTCCAA TGCCACCTCT GGACGTTCCT CTCGCAGCTT CTCTAATTCG TTCGATTGAA
GGGGTTGCCA AAGCGGAAGG ACCCTCCTAA
 
Protein sequence
MEKNSTVIVV VAVALVGQGP RVLMQKRPAN KAHGGLWEFP GGKVEMGETP ESALVRETDE 
ELGVALEPAD LEPLSFATQA LGSAGGSMVL LLYRARKWRG DPKALEPDTE VAWVDFSALL
DLPMPPLDVP LAASLIRSIE GVAKAEGPS