| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1889 |
|---|
| Symbol | |
|---|
| ID | 3917110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1998001 |
|---|
| End bp | 1999515 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640444633 |
|---|
| Product | tryptophan halogenase |
|---|
| Protein accession | YP_497163 |
|---|
| Protein GI | 87199906 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.140819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCTT CGAACAAGCG CAGGATAGTC ATCGCCGGTG GCGGGACGGC CGGATGGATG
ACGGCCGCCG CGCTTGCCCG CTTTGCCATG CCGCACTGGC AGGTCACGCT CGTCGAATCC
GAAGAGATCG GGACGATCGG CGTCGGCGAA GCGACCATTC CGATGGTGCG GCTATTCAAC
CGCTCGCTGG GGATCGACGA ACGCCAGTTC CTGCGCGAGA CCCACGGTAC GTGGAAGCTG
GGCATCGCCT TCGAGGGCTG GGGCGGCTTC GACGAGCGTT ACATCCATGG CTTCGGACTG
ACAGGCCGGA GCCTTGGCGT CCTGCCCTTT CACCATTACT GGTTGCGGGG TCGCGCCATG
GGAGCCGCAG GACCGCTGGG CGATTACGTG CTTAATGCCG TCGCCTGCGA GGAAGGCCGT
TTCGCCCACA TCGACCGTCC AGAGGGCAGC GCATTGCCGC CGATGCCCTA TGCCTATCAT
TTCGACGCGT CGCTCTATGC CGCGTTCCTG CGGCGCTATG CCGAAGAGCG TGGCGTGCTG
CGGATCGAAG GTCGTATCCA GTCGGCCGCG CGCGATTGTT CCACCGGTGA CATTGCCTCG
CTGAAGCTTG CCGATGGCCA CGAGGTGGAG GGCGATCTGT TCATCGATTG CTCGGGCTTT
CGCAGCCTTC TCCTCGGACA GGAAATGGGC GTCGAGTACG TCGACTGGAG CCACTGGCTG
CGCTGCGACC GCGCGGTTGC CGTTCCGTGC GAGCGCGCCG GGCCGCTGGT TCACTATACG
CGGTCCATTG CCCAGCCCGC AGGCTGGTGC TGGCGCATCC CGCTGCAGCA CCGGACCGGC
AACGGCCACG TGTTCTGTTC CGACGCGATG GGCGAGGACG AGGCGACCGC GCGCCTTCTG
GGAAGGCTCG ACGGGCGCCA ACTGGCCGAG CCGCGCACGA TCCGGTTCAA GGCAGGGCGG
CGCGAGACGT TCTGGAAGAA CAACGTGGTT GCGGTCGGCC TGTCCTCCGG CTTCATCGAA
CCTCTGGAAT CGACTTCCAT TCACCTGATC CAGACGGCAA TCAGCCGGAT CATCGATTTT
TTGCCGAACG GGCCGGTACA GGCAGCGGAC CGCGATGCGT ACAACCGGCT TTCGGTCTTC
GAGATCGAAC GCATCCGCGA CTTCGTGATC CTTCACTACG TCGCAAATGG CCGTCACGGA
GAGCCGTTCT GGGATAGCCT CAGAGCGATG GAAATTCCCG AAACGCTGGC TAAGCGCATC
GCCATGTTCC GCGCATCGGG CCGCATCGTG CGGGAACACG AAGAGCTTTT CGACGTGCCC
GGTTGGGTGC AGGTAATGGT GGGGCAGGGG ATCATGCCGG AGCGGTGGCA CCCTCTTGCC
GACCAATTGG ACCGGACCAA CCTTTCCGCG TTCCTCGAAA CCGTCAGCGA AGCCTACAGA
AAGGACGTTG CGCGAATGCC CCTTCACGCC GACTACCTCG AACATGTCTG CGGAAAGGTG
GCTGCCCATG CGTAG
|
|---|
| Protein sequence | MPPSNKRRIV IAGGGTAGWM TAAALARFAM PHWQVTLVES EEIGTIGVGE ATIPMVRLFN
RSLGIDERQF LRETHGTWKL GIAFEGWGGF DERYIHGFGL TGRSLGVLPF HHYWLRGRAM
GAAGPLGDYV LNAVACEEGR FAHIDRPEGS ALPPMPYAYH FDASLYAAFL RRYAEERGVL
RIEGRIQSAA RDCSTGDIAS LKLADGHEVE GDLFIDCSGF RSLLLGQEMG VEYVDWSHWL
RCDRAVAVPC ERAGPLVHYT RSIAQPAGWC WRIPLQHRTG NGHVFCSDAM GEDEATARLL
GRLDGRQLAE PRTIRFKAGR RETFWKNNVV AVGLSSGFIE PLESTSIHLI QTAISRIIDF
LPNGPVQAAD RDAYNRLSVF EIERIRDFVI LHYVANGRHG EPFWDSLRAM EIPETLAKRI
AMFRASGRIV REHEELFDVP GWVQVMVGQG IMPERWHPLA DQLDRTNLSA FLETVSEAYR
KDVARMPLHA DYLEHVCGKV AAHA
|
|---|
| |