| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1873 |
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| Symbol | |
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| ID | 3917094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1974514 |
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| End bp | 1975353 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640444617 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_497147 |
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| Protein GI | 87199890 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.356461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAACTC TCGACAGGTT CGATATCAAG GGGCGCAGTG CGCTCGTCAC AGGCGCGGCT
TCGGGCATCG GACTGGCCTA TGCCGAGGCG ATGGCCGAGG CGGGGGCGGC AGTGACGCTG
ACCGACATCG ACGCGGAAGG CGCGGAGCGC GAGGCTGCTC GTCTTCGTGC CGAAGGGTAC
GAAGTCCGTG CCGAGAAGCT GGACGTTTCC GACTGGGACA ACGTCGCGGC CGCCTTCGAC
GCGCACGACA AGGCCTATGG CGGGCTGGAC ATCTGCTTTG CCAATGCCGG TATCGACACC
GGTGCGGGAT TCTGGAACCC TGCGGGGCAC CGGAACCCCG AGGGCCAGGT CGATACCTAC
GACCACAAGC GCTGGGACAG GTCGATCCAG ATCAACCTCA ACGGGGTTTT CTATACCGTG
AGCAACGCGG TGCGGATCAT GAAGAAGGAA GGCCGCGCCA ATGGCCGCAC CGGCGGGTCG
ATCGTTACGA CCGCATCGAA CGCCGGCCTC GTGACCGAGC CGATCGTCGG CCTGCCCTAT
ATGCCCGCAA AGGCCGGCGT CCTGCACATG GTGCGCGCGC TGGGACTGGA GCTGGCCGAA
TTCGGCATCC GCATCAACGC GATCGCGCCG GGGCCGTTCG TGACCAACAT CGGTGGTGGC
TGGCTCAAGA AGGACCCGGT CGCGCGGGCT GCGTGGGATG CCATCGTGCC GCTTGGATCG
GTTGCGGAGA CCGATCAGAT CAAGCCGCTG GCGCTGCTGC TGGCGTCGGA CGCTTCGGAC
TACATGACCG GCAGCCACGT GGTGATCGAT GGCGGCATGA TGCTCGGCAA GTACAAGTAA
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| Protein sequence | MGTLDRFDIK GRSALVTGAA SGIGLAYAEA MAEAGAAVTL TDIDAEGAER EAARLRAEGY
EVRAEKLDVS DWDNVAAAFD AHDKAYGGLD ICFANAGIDT GAGFWNPAGH RNPEGQVDTY
DHKRWDRSIQ INLNGVFYTV SNAVRIMKKE GRANGRTGGS IVTTASNAGL VTEPIVGLPY
MPAKAGVLHM VRALGLELAE FGIRINAIAP GPFVTNIGGG WLKKDPVARA AWDAIVPLGS
VAETDQIKPL ALLLASDASD YMTGSHVVID GGMMLGKYK
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