| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1868 |
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| Symbol | |
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| ID | 3917089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1969087 |
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| End bp | 1971690 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640444612 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_497142 |
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| Protein GI | 87199885 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.215038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGGCG CCAGCAGCAA GAATCAACAG GGAGAGACCA ACATGAGATT TGCATCGATC
TCCATCGCAG CGCTCGCGAC AGCGATCGCC GCACCTGCCT TTGCGCAGGA CCAGGCCCAG
GCCGACGACA CCCGCAGCGG TGGCATCGCC GAGATCGTCG TGACCGCGCA GAAGCGCGCG
GAAAACGTCC AGGACGTGCC GATCGCCATC ACCGCGTTTA CCGCCGGTGC ACTGCAGGAA
CGCGCCGTGG GCGACGTTTC GGCGCTTTCC GGCATCACCC CCAACGTGAC GCTCGACGCA
TCGACCCCGT TCTCCGGTTC GAGCGCGGTG CTGGGTGCGA CCATCCGCGG CATCGGTTCG
TCGGACTTCG CCTTCAACAT CGACCCCGCT GTCGGCGTTT ATCTTGACGG CGTCTACCTT
GGCCGTTCGA TCGGCGCGAA CCAGGACCTG CTCGACGTCG AGCGCATCGA AGTCCTGAAG
GGCCCGCAGG GCACGCTGTT CGGCCGCAAC ACCATCGGCG GCGCGATCTC GATCGTGACC
CACAACCCCG GTGACGAATT CCATGCCAAG GGCGACGTCA CGGTTGGCCG TTTCAACCGC
ATCCAGGCGC GCGGGCTGGT CGACATTCCG CTGGCTCCGG GCCTCAGCTC GTCGGTTGCC
TTCGGTCTGC ACAAGCGCGA CGGCTTCCAG AAGCGCGTCG CCTATTCCGA TCCCGGCGCG
AACGACAGCT TCACACTGTT CCCGGCTTCG GGCTACGAAA CCCGCAGCCG CCAGGGGGGC
GACAATTCGT GGAACCTGCG CGGCAAGCTG CGCTGGGACG ACGGCGGCAA GTTCCGCGCC
ACCTTCAGCG CCGACTATAC CAACATCGAC CAGGATTCGA CGGCCAACAC CGTGCTTGCC
GTCACCCCGA TCCCGGGGCC GTTCGCGGGC GTTGCCGAGA ACAACATTCC GGGCACCGCG
CTTGACGTCG TCACCGGCAG CTCGGGCTTC CTGTTCGCAG GTCTCTACAA CTTCTGCATT
GGAGCCACCG CACAGCAGAT CGCCGACCGC AATGCGACCA ACCTGTGCGG CCCGCGTTCG
AGCGTCAACG GCTACCTGAC CCTGCCGGGT CTCGCCAGCC GCAACGTCGA CGGTGACCCG
TACAACGACC TGCTGCCTTA CGACGGCCGC TGGGTGAACA CCGACAAGGA CGTCAGCTAC
GCCAACGGCA ACAACTTCTC GAAGCTGAAG CAGTGGGGCC TTGGTCTCAA CCTCGAGTAC
GACCTGACTG ACAACATCGC GCTGAAGTCG ATCACGTCGT ATCGCGAAGT GGACTTCAAG
GCAGGCGTCG ACCTCGACAA CTCGCCGCTG CCGATCCTCC AGACGAGCTT CATCGTCGAC
CAGTACCAGT TCAGCCAGGA AGTCCAGCTT ACCGGTTCGG CAATGGACGG CGCCCTGAAC
TTCGTGCTCG GCGGCTATGG CTTCAAGGAA AACGGCGACC TGCGCGACTT CGTGACCTTC
TCGGCCGGCC TGCTGCAGGT TGACGGTCCG GGCAAGGTCG ACACCGAGGC CTATGCCGGG
TTCGGTCAGG TCGACTGGCG CGTGAACGAC CTCATCGGTA TCTCGGTGGG CGCGCGCTAC
ACCAAGGAGA ACAAGCGCTA CGACGGTGCG CAGTCGGACA TCAACGGCTT CAACTACAAG
CTGTTCAACT GCATGGCGCT GGACCCGGCG ACCGGCAACC CGAGCGCGGA ATGCGCCGCG
GGCGTCGGCT TCCCGATCCC GTCGGAACCG TTCCGCTACT ATCCAACTTC GCCGAACAAG
CAGACCTTCG ACGACTTCTC GTACAAGCTG GGCCTCCAGC TTCACCCGAC CGAAGACGTC
ATGGCCTATG GCTCGTTCTC GCGCGGGTAC AAGACGGGTG GCTGGACGAC GCGCCTGTCC
AACCCGCTGC CGGTCGCGCC GACCTTCGGC GAGGAAGTTG CCGAGACCTT CGAGGCTGGC
GTCAAGTCGA CGCTGCTTGA CCGTCGCCTG CAGCTGAATG CAGCGGTGTT CACGACCAAG
TACAAGGGCA TCCAGCTCAA CTTCCAGCAG GGCGTTTCGC CGACCATCCA GAACGCAGGC
GACGCGCGGA TCAAGGGCTT CGAGATCGAG GCGGTTGCCG CCCCGGCCGA TGGCTTCACG
ATCACCGCTT CGGCGGGCTA CCTCGACGCC TACTACACCA ACGTGCTGGC GCCGGCGCAG
GTTGCGCCCA ACCCGTTCCA GCTCGGCGTG CAGAAGGGGT CGGCCCTGCC CAAGGCTCCG
GAGTGGAAGT TCAACGTCTC GCCGCGCTAT GAAGTGGCAG TGGGCAACGG CAAGATCGTA
GCCCTGGCCG ACTGGACCCA CACCACCGGC ATGCGCAACG ATACCGAAGG CACCATCCTG
CTGCTGCGTC CGACGACCGA CATCGTCAAC GCCAGCCTGC AGTACCAGGC TCCCGACAAC
CAGTGGAACC TGACGGTCGG CGGGACCAAC ATCACCAACG AACGCTATCT GGTGACCGGT
CAGGCCCAGA TCGCGGGCGG CCAGATCTAC GGCACCTACA GCCGTCCGGC CGAATGGTAC
GTCAGGCTCG GTTTCGAGTT CTGA
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| Protein sequence | MPGASSKNQQ GETNMRFASI SIAALATAIA APAFAQDQAQ ADDTRSGGIA EIVVTAQKRA
ENVQDVPIAI TAFTAGALQE RAVGDVSALS GITPNVTLDA STPFSGSSAV LGATIRGIGS
SDFAFNIDPA VGVYLDGVYL GRSIGANQDL LDVERIEVLK GPQGTLFGRN TIGGAISIVT
HNPGDEFHAK GDVTVGRFNR IQARGLVDIP LAPGLSSSVA FGLHKRDGFQ KRVAYSDPGA
NDSFTLFPAS GYETRSRQGG DNSWNLRGKL RWDDGGKFRA TFSADYTNID QDSTANTVLA
VTPIPGPFAG VAENNIPGTA LDVVTGSSGF LFAGLYNFCI GATAQQIADR NATNLCGPRS
SVNGYLTLPG LASRNVDGDP YNDLLPYDGR WVNTDKDVSY ANGNNFSKLK QWGLGLNLEY
DLTDNIALKS ITSYREVDFK AGVDLDNSPL PILQTSFIVD QYQFSQEVQL TGSAMDGALN
FVLGGYGFKE NGDLRDFVTF SAGLLQVDGP GKVDTEAYAG FGQVDWRVND LIGISVGARY
TKENKRYDGA QSDINGFNYK LFNCMALDPA TGNPSAECAA GVGFPIPSEP FRYYPTSPNK
QTFDDFSYKL GLQLHPTEDV MAYGSFSRGY KTGGWTTRLS NPLPVAPTFG EEVAETFEAG
VKSTLLDRRL QLNAAVFTTK YKGIQLNFQQ GVSPTIQNAG DARIKGFEIE AVAAPADGFT
ITASAGYLDA YYTNVLAPAQ VAPNPFQLGV QKGSALPKAP EWKFNVSPRY EVAVGNGKIV
ALADWTHTTG MRNDTEGTIL LLRPTTDIVN ASLQYQAPDN QWNLTVGGTN ITNERYLVTG
QAQIAGGQIY GTYSRPAEWY VRLGFEF
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