| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1808 |
|---|
| Symbol | |
|---|
| ID | 3918367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 1906678 |
|---|
| End bp | 1907541 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640444549 |
|---|
| Product | signal peptidase I |
|---|
| Protein accession | YP_497082 |
|---|
| Protein GI | 87199825 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.372454 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA CGATGAACGA CACGCCCGAA AACCAGCCCG CGCCTTTGGC AGACCCGGTG
CCCGCCGTTA CGCCAGCAAA GAAGGAGAAG AAGGAGGACA GTTTCCCCGT CTTCCTCGTG
AAGCTCGTTC TGGTCGTGGC GATCTTCCGC AGCTTCATCT TCGCGCCGTT CAACATCCCG
TCGGAGTCAA TGCTCCCGAG ACTGGAAAAC GGCGATTACC TGCTGGCGGC GAAATGGCCC
TATGGCTTCA GCAAGTATTC GCTGCCGTTC AGCCTGCCGC TTATCCCCGG CCGCATCATG
GCCGGGCAGC CCGAGCGTGG TGACGTGGTC ATCTTCAAGG CGCCCCCGGG CAATGATGTC
GATTATATCA AGCGGGTAAT CGGGATTCCC GGCGACACGG TCCAGATGAT CGGCGGCGTG
CTGCACCTCA ACGGCCAGGC CGTTCCCAAG GAGCGGGTCG AGGACTTCGT CATTCCGGTG
AGCCCGAACA CGGACTGCCT GTCGCCCGAA TTCGCCGCGA CGGAAGCCGA TGGTCGCCAG
ACCTGCCACT ATCCGCAATA CCGCGAGACG TTGCCGGGAG GGAAGACCTA CAACGTACTC
GACCTCGGCC AGCGCCCTGT CGACGACACC CCGCCAGTGG TGGTCCCCGA GGGCGACCTG
TTCCTGATGG GCGACAACCG CGACAATTCG ATGGATAGCC GCTTCCCGGC AATGGAAGGC
GGCGGCATCG GCCTCGTTCC GCAGGAAAAC CTCGTCGGCC GTGCCGCGAT CATGATGTGG
TCGACCGACG GCAGCGCCAA CTGGTTCCTG CCCTGGACCT GGTTCACCGC TGCCCGCTGG
AACCGGATCG GGGGCACGTT CTGA
|
|---|
| Protein sequence | MTATMNDTPE NQPAPLADPV PAVTPAKKEK KEDSFPVFLV KLVLVVAIFR SFIFAPFNIP
SESMLPRLEN GDYLLAAKWP YGFSKYSLPF SLPLIPGRIM AGQPERGDVV IFKAPPGNDV
DYIKRVIGIP GDTVQMIGGV LHLNGQAVPK ERVEDFVIPV SPNTDCLSPE FAATEADGRQ
TCHYPQYRET LPGGKTYNVL DLGQRPVDDT PPVVVPEGDL FLMGDNRDNS MDSRFPAMEG
GGIGLVPQEN LVGRAAIMMW STDGSANWFL PWTWFTAARW NRIGGTF
|
|---|
| |