Gene Saro_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1798 
Symbol 
ID3918357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1895894 
End bp1896814 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID640444539 
Productbeta-lactamase-like 
Protein accessionYP_497072 
Protein GI87199815 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGCT TTTCCAGGAT CGTCGTTGCT TTCCTCATCT TGCTTGCGGC GGCCTACTAC 
TGGCTCCTGG TCAACCGGGG GCAACCGGCC CTGCCCGGCC GCAGCATCGA TATCGCAGCT
CTTCGCAAGG CGTCGGACGC CATGCCGGGC GAGAAGCCGA CCGGACTGGA ATATGCGATC
ATCGCAACCC GGCGCATTCC CGGCGCCGCA CTGGCGGCAG GAACGGGGCT CAGGCCAATT
TCCAGCGGCG TTGTCGTCTG GCGAATCGTC ACGCCGCGCG GCGGCATCGT GATCGACAGC
GGCCTTTCGC GAAACGATGC CGCCTCGATG GGCTTCAAGG AATACGACGG CCGCGCGATG
GCACTGGCGG GCCGCTGGAT GGAGCAGGCC GAGCTTCTTC TGTTCACGCA CGAGCATGTC
GACCACGTCG GCGGATTTCT CGATCACCAG CCATTCCAGG CCGTGGCGGG CAAGGCCGTG
CTTTCGCCGC GCATGCTCCA GGGCATGAAT GCGCTCTGGC GCGAGAATGC GCGGCTGTTG
CCTCCGCCAC GCTTGGCGGA GCCGGTCCAG CCCGTGGCGC CAGGCGTGGT GCTGGTCGCC
ACGCCGGGGC ATACGCCGGC TTCCCAGATG ATCTATGTCC GGCTTGCCGA TGGTCGGGAA
TATCTGTTCG CCGGAGATAC CGCCTCGCTG CGCGCCAACT ACGAGATACC GACGCCGCGC
TCCCGGCTCG TCGCCGACTG GCTGGCACCA GAGGACCGGC CGGTTGCCTT CGCCTGGCTC
GACGCGCTCA AGCGCCTGAA GGCCAGGCAC GAGGCGCTGG TGATAGTGCC CTCGCATGAT
CCCGACTGGA TTGCCGCCAC CGCTGCGAAG GCCGGCTTCA GTCGCCTTCC CGCCCCCGCA
AAAACCCTAT CAGTCAATTA G
 
Protein sequence
MSRFSRIVVA FLILLAAAYY WLLVNRGQPA LPGRSIDIAA LRKASDAMPG EKPTGLEYAI 
IATRRIPGAA LAAGTGLRPI SSGVVVWRIV TPRGGIVIDS GLSRNDAASM GFKEYDGRAM
ALAGRWMEQA ELLLFTHEHV DHVGGFLDHQ PFQAVAGKAV LSPRMLQGMN ALWRENARLL
PPPRLAEPVQ PVAPGVVLVA TPGHTPASQM IYVRLADGRE YLFAGDTASL RANYEIPTPR
SRLVADWLAP EDRPVAFAWL DALKRLKARH EALVIVPSHD PDWIAATAAK AGFSRLPAPA
KTLSVN