Gene Saro_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1793 
Symbol 
ID3918352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1890515 
End bp1891741 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content66% 
IMG OID640444534 
Product6-aminohexanoate-dimer hydrolase 
Protein accessionYP_497067 
Protein GI87199810 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGCG AACTGCTCGA CGGGCTGACG AGCGATCCGG TGCGTATGGG CTGGATGCAG 
GGCTCGCCGC CGCCGCCGGA AAAGGTCCTG CTTGCCGCTC GCGCGGATCA CATGCGCTTT
CCGATGATCC GTTGGTCATA TTCCAACATG CGCCAGTTCG TGCCCACGCG CCGCGTCGCC
GCTTCGGGCG AGGGACGGCC GTTCGAGCGC GCCTTGCGTC CCGATCTCGC GGACGTCTCG
TTCGTGCCGC TCGGCGGCGA TGATCCGGTC GCATTCGGAC AATCGCTGGC CGAGGCCTTT
ACTGATGGCA TCCTTGTCCT TCACCGCGGC AAGGTCGTGC TCGAACGCTG GCTCGGCGTG
ACCGGACCCC AGACCCGCCA CATTGCCTTT TCCGTGACCA AGAGCTTCGT CGGCACAATT
GTAGAAATGC TGGCGGATGA AGGGCGCATC GATCCGGCGG CAATGATTTC CGCCTACCTG
CCCGAAATGG CCGGCAGCGG CTTTGCCGAC GCGACGGTGC GGCAGGTGCT CGACATGACC
ACCGCGCTCG ATTTCTCCGA GGACTACGCC GATCCCGAAT CCGGCATCGG CGCCTACAGC
GCAGCGCTCG GCCTGACCCC GCGCAAGCCC GACTACGCGG GGCCGGCCGA CTTGTGGAGT
TTCCTGCCGT CGGTGGCGAA GTCGGGCGAT CATGGCCGTG GCTTCACCTA CCGCACGCCC
AATACCGACG TTCTTGCGTG GCTGGTCAGC CGGGTAGAGG GCCGGCACTT CGCCGATGTC
CTGACCGAGC GTTTGTGGCA GCCGCTCGGA ATGCTGGGTG ATGCCGACCT GATCGTTGAC
CAGGCGGGCT CGCCCTTTGC CGGCGGCGGC CTCAACCTCC GTCTGGAAGA CCTTGCCCGC
TTTGGCGAGG CCATGCGTCT GGGTGGCCTT GGCGTCATTC CCGCCGGCGT CGTCGCGCGC
ATCGCCAGCG GCGGCGATCC AGCGCATTTC GACCGCACCC GCTACCCGCA ACTTCCGGGG
TGGAGCTATG GCAGCCAGTG GTGGATCAGC AACAATGCCC ATGGATGCTT CTCCGCACGG
GGCATCCACG GGCAGACGCT CTGGGTCGAC CCGGCGGCTG AAATGACCAT CGCTCGATTC
GCGTCGCATC CCACTGCCGC CAACGGCGCG AACGACCCGC TATCCCTGCC TGCGTGGGCC
GCACTGGCCG ATGCTCTAAG TCGCTGA
 
Protein sequence
MAGELLDGLT SDPVRMGWMQ GSPPPPEKVL LAARADHMRF PMIRWSYSNM RQFVPTRRVA 
ASGEGRPFER ALRPDLADVS FVPLGGDDPV AFGQSLAEAF TDGILVLHRG KVVLERWLGV
TGPQTRHIAF SVTKSFVGTI VEMLADEGRI DPAAMISAYL PEMAGSGFAD ATVRQVLDMT
TALDFSEDYA DPESGIGAYS AALGLTPRKP DYAGPADLWS FLPSVAKSGD HGRGFTYRTP
NTDVLAWLVS RVEGRHFADV LTERLWQPLG MLGDADLIVD QAGSPFAGGG LNLRLEDLAR
FGEAMRLGGL GVIPAGVVAR IASGGDPAHF DRTRYPQLPG WSYGSQWWIS NNAHGCFSAR
GIHGQTLWVD PAAEMTIARF ASHPTAANGA NDPLSLPAWA ALADALSR