Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1736 |
Symbol | |
ID | 3916311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1830078 |
End bp | 1831742 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640444477 |
Product | DNA repair protein RecN |
Protein accession | YP_497010 |
Protein GI | 87199753 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0149698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGACCA GCCTGTCGAT CCGCAATGTC GTGCTCATCG AAGCGCTCGA CCTGTCGTTC GGCGGTGGGC TCGGCGTGCT CACCGGCGAA ACCGGCGCCG GCAAGTCGAT CCTGCTCGAC GCTCTCGGCC TCGTTCTGGG CGACCGCGCC GATAGCGGCC TCGTTCGTGC CGGAGAGGAC CAGGCCAGCG TCACCGCCAC TTTCGAGTTC GACCGCCTGC CCGATGCCAT CCGCCAGGCC CTGGCCGAGG CAGAGATCGA CGTCGAACCG GGCGAACCTC TGATCGTCAA GCGCCGCCTC AAGGCCGATG GCGGCTCCCG CGCCTTCATC AACGACCAGC CCGTTGGCGT CGCCCTCCTG CGCGAACTGG CCCGCAGCCT GGTCGAACTC CACGGCCAGC ACGACGATCG CGGCCTCGTC AACGCGCGCG GCCACCGGGC CCTGCTCGAT CGCTATGCCG GGGCGGATGT CGCCGGTGTC GAGGCGGCGT GGGGCAAGTG GCGCAAGGCC GAGGAAGCGC TGGCCGCCGC CCGCGCCCAG GTCGCCCGCG CGGCCGAGGA ACAGGATCTA CTCCTCGCCC ATCTCGCCGA ACTCACCGCG CTTGCTCCGG TCATCGGCGA GGAAGAGGAA CTGGCCGGCC AGCGCGCCGA CATGCAGAAG GGCGAACGCC TCTCGGGCGA TCTCGCCGAA CTCCAGCGCC TGTGGGAAGG GTCCGACTCC GCGCTGGCCA TCCTGCGCAG CGCCGCGCGC CGGCTCGATC GCATCGCATC GGAACACCCG ATGCTGGCAG AAGCCCTCGA AGCGCTCGAC CGCGCGGTGA TCGAGGCGGG CGAGGCCGAG GACAAGCTCG CCAGCGCGGC CGAGGCACTG GCCCACGATC CGGCGCTGCT CGACCGTATC GAAACCCGCC TGTTCGACCT GCGCGCCGTC GCCCGCAAAC ACGCCTGCGC GGTTGATGAT CTGCCCCACC GGATGCACGA GATGCGCCTG GCGCTCGATG CCATCGAAGG CGGCGAGGCG CAGATCGCGG ACCTCGAACG CGCCGCCCGC GAAGCCGCGC TCGATTACCA GGCCAAGGCC GAGACGCTCT CGGTCCAGCG TGCCGAAGCC GCGCGCCGCC TCGACAAGGC CGTGGCCGCC GAACTGGCCC CGCTCAGGCT CGACGCGGCG AGGTTCCACA CCGCCGTCCT GCGTCTGCCG GAAGACCGCT GGGGCGCGGG CGGCATGGAC GCGGTCGAAT TCCTGATATC GACCAACCCC GGCGCCGATT TCGCGCCGCT CGGCAAGATC GCGTCGGGCG GCGAGCTTTC GCGCTTCATC CTCGCGCTCA AGGTCGCGCT GGCCGAAGAA GGCGGGGCCG CGACGATCAT CTTCGACGAG ATCGACCGGG GCGTCGGGGG CGCGGTCGCC AGCGCCATCG GCGAACGCCT TGCGCGGCTC GCCTCCGGTG GCCAGCTTCT CGCCGTCACC CACAGTCCCC AGGTCGCCGC GCGCGGTGAC CGGCACTACA TGATCGCCAA GTCCTCCGAA GGCACCGTGA CCCGCACGTC GGTCAGCCTG CTCGATGCGG CGGCGCGCAA GGAAGAAATC GCCCGCATGC TCTCCGGTGC CGAAGTTACC GCCGAAGCCC GCGCCCAGGC AGACCGCCTG CTCGAACAGG CCTGA
|
Protein sequence | MLTSLSIRNV VLIEALDLSF GGGLGVLTGE TGAGKSILLD ALGLVLGDRA DSGLVRAGED QASVTATFEF DRLPDAIRQA LAEAEIDVEP GEPLIVKRRL KADGGSRAFI NDQPVGVALL RELARSLVEL HGQHDDRGLV NARGHRALLD RYAGADVAGV EAAWGKWRKA EEALAAARAQ VARAAEEQDL LLAHLAELTA LAPVIGEEEE LAGQRADMQK GERLSGDLAE LQRLWEGSDS ALAILRSAAR RLDRIASEHP MLAEALEALD RAVIEAGEAE DKLASAAEAL AHDPALLDRI ETRLFDLRAV ARKHACAVDD LPHRMHEMRL ALDAIEGGEA QIADLERAAR EAALDYQAKA ETLSVQRAEA ARRLDKAVAA ELAPLRLDAA RFHTAVLRLP EDRWGAGGMD AVEFLISTNP GADFAPLGKI ASGGELSRFI LALKVALAEE GGAATIIFDE IDRGVGGAVA SAIGERLARL ASGGQLLAVT HSPQVAARGD RHYMIAKSSE GTVTRTSVSL LDAAARKEEI ARMLSGAEVT AEARAQADRL LEQA
|
| |