Gene Saro_1662 details

Gene Information

• Locus tag: Saro_1662
• ID: 3918771
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: -
• Start bp: 1741060
• End bp: 1743120
• Gene Length: 2061 bp
• Protein Length: 686 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640444403
• Product: TonB-dependent receptor
• Protein accession: YP_496936
• Protein GI: 87199679
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG4771] Outer membrane receptor for ferrienterochelin and colicins

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.917445
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGCCAT TGGCCCGCCC CTTCTTCCTG ATCGCCACAC TCGCCCCCTG CGCTGCCCAC 
GCGCAGGATG CGGTCCAGCC CGAAATCGTG GTGATCGGCA CCGGCCTTCA GGCCCCGCCG 
TCGGCACCGG CCTACAACGT CCAGCAGATC GATCGCGAAC GCCTTCTCGA AACCGCATCC 
GGCCGACTCG AGGACGCCCT TTCCTCTGTC GCGGGTTTCC AGCAGTTCCG CCGCTCCGAC 
AGCCGTTCGT CCAATCCTTC CGCGCAAGGC GTGACGCTGC GCTCGCTTGG CGGCAATGCG 
ACCAGCCGCA CGCTCGTCCT GCTCGATGGC GTGCCGATGG CCGATCCATT CTTCGGCCAT 
ATCCCTTTCA GTGCGATAGC CCCCGAACGG CTCGCGACTG CACGCGTCAC GCGCGGCGGC 
GGCGCAGGCG CGTTTGGCGC GGGCGCGGTT GCCGGAACGG TGGAACTCGA AAGCGCGAAC 
GCGGACCAGC TCGGCCTCGT CCAGGCTGGT GCGCTGGCGA ACGACCGTGG CGAGACGGAA 
CTTTCCGGCG CCCTCGCCCC CCGCGTGGGC AAGGGGTTTG CGGTGATCTC CGGCCGCTGG 
GACCGCGGTC AGGGCTTCTG GACCACGCCC GTCGGCCAGC GCGTGCCGAT CAGCGCCCGG 
GCACGCTACG ACTCATGGTC GGCCGGCCTA CGCCTGGTCG CCCCCCTGTC CACCGACGTC 
GAGTTGCAGA TGCGCGGGCT TTTGTTCGAC GACCGGCGCA CCTTGCGCTT CCGGGGGGCA 
GACACATCCT CGAGCGGACA GGATGCTTCG TTGCGCCTCG TTGGGCGTGG CGCTTGGGCC 
TTCGACGTGC TCGCCTATGT GCAGGCGCGC GACTTCACCA ATGTCGTCAT CAGTTCGACC 
AGCTTCCGCA AGACGCTCGA CCAGCGAGCC ACGCCTTCGA CGGGCGTGGG TGGCAAGGCC 
GAATTGCGCC CGCCCGTTGG CGGTAACCAC GTGCTCAGGC TCGGCGCGGA CTACCGCCTC 
AACGATGGCG ACATGGCCGA GGACGCATAT TCGGCGGCTA CTGGCCTGGT TACCGCCCGT 
CGCCGGGCAG GTGGCAAGAC CAGCGACCTC GGCCTGTTCC TCGAAGACGA CTGGACGCTC 
GGCCGCCTCG TCCTCAACGC CGGCGCCCGC GCCGACCGCT GGACAATCCG CGACGGCTAT 
TTCCTTGAGC GGAGCCCCTC GGGCGCCACG ACCATCGATT CCGCGCTGGA CCCCGCCTTT 
GCCGACAGGT CCGGCTGGCA GGCAAGCTTC CGAGGCGGCG CCGTGTTCAG GGCCACCGAC 
ATGCTCTCGC TTCGCGCTGC CGGGTACACC GGATTGCGCT TGCCGACGCT CAACGAATTG 
TACCGCTCGT TCAGCGTCGT CGCGCCGCGC AGCGAGGGTG GCATCGCGAT CACCGCAACG 
CAGCGCAATC CGCTTCTGCA CAACGAGAAG CTCGAGGGCT TCGAAGCGGG GCTGGACTTC 
ACCCCCGCCC CCGGCCTGGC GTTCAACGCG ACTGCCTTCG ACAACCGCAT CCGCAACGCC 
ATCGCCAATG TCACCCTGGG CACGAGCGGC AACACGACCA CGCGCAAGCG TCAGAACGTC 
GATGCCGTCC ATGCGCGCGG TCTTGAATTC GGCGCCAGGC TGCGGGCGGG CGCGATCTCG 
CTCGATGGTT CGCTGGCATG GACCGACGCC GAGGTGGAGG CATCGGGCAT TTCCGCCTCG 
CTCGACGGCA AGCGTCCCGC GCAGACGCCG CGTTGGGCGG GCACGGCCAC CCTTGCCTGG 
CGGCCCGCCG AACGCTGGTC GCTGGGCCTC ACCCTGCGGC ACGTTGGCGC GCAGTTCGAG 
GACGATCTGG AAACCGACCT CCTCCCGTCG GCCACAACGC TCGACGGCTT TGCCCAGCTT 
CCGCTCCATG GCCCGATCAG CCTTGTCCTG CGCGGCGAGA ACCTTACTGG CGAGACGATA 
GTGACGCGGC TGCAGGACGG TTCTATGGAT ATCGGCACGC CGCGCACGTT CTGGGCGGGT 
ATTCGTGTGG AGGTCCGTTG A 

 

Protein sequence

MRPLARPFFL IATLAPCAAH AQDAVQPEIV VIGTGLQAPP SAPAYNVQQI DRERLLETAS 
GRLEDALSSV AGFQQFRRSD SRSSNPSAQG VTLRSLGGNA TSRTLVLLDG VPMADPFFGH 
IPFSAIAPER LATARVTRGG GAGAFGAGAV AGTVELESAN ADQLGLVQAG ALANDRGETE 
LSGALAPRVG KGFAVISGRW DRGQGFWTTP VGQRVPISAR ARYDSWSAGL RLVAPLSTDV 
ELQMRGLLFD DRRTLRFRGA DTSSSGQDAS LRLVGRGAWA FDVLAYVQAR DFTNVVISST 
SFRKTLDQRA TPSTGVGGKA ELRPPVGGNH VLRLGADYRL NDGDMAEDAY SAATGLVTAR 
RRAGGKTSDL GLFLEDDWTL GRLVLNAGAR ADRWTIRDGY FLERSPSGAT TIDSALDPAF 
ADRSGWQASF RGGAVFRATD MLSLRAAGYT GLRLPTLNEL YRSFSVVAPR SEGGIAITAT 
QRNPLLHNEK LEGFEAGLDF TPAPGLAFNA TAFDNRIRNA IANVTLGTSG NTTTRKRQNV 
DAVHARGLEF GARLRAGAIS LDGSLAWTDA EVEASGISAS LDGKRPAQTP RWAGTATLAW 
RPAERWSLGL TLRHVGAQFE DDLETDLLPS ATTLDGFAQL PLHGPISLVL RGENLTGETI 
VTRLQDGSMD IGTPRTFWAG IRVEVR