| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1646 |
|---|
| Symbol | |
|---|
| ID | 3918755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1722084 |
|---|
| End bp | 1722953 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640444387 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_496920 |
|---|
| Protein GI | 87199663 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAC GAGCCCAGCT CCGCCACTTC CTGGCGCTTG TCGAAAGCGG CAACTTCACC
CGCGCGGCGG AGCGGCTGGC GATCTCGCAG CCCACGCTTT CCGCCTCGAT CGCCGAACTC
GAACGGATGG CCGGCACACG TCTGTTCCTG CGCGAGAAGC GGCAGGTCCG CCTGACTGCG
GCTGGCGCGC GGCTCGTCAA CCATGCGCGG GCAATCGAGC GCGAGTTCCG GGCTGCCGAA
GCAGCCTTCG TCGAAGCCCC GGTACCACTG GCGCCGCTGC GACTGGGCAC GATACCGTCG
GTGTCGACCG CGATGCTTTC CGCGGCGGTG CGGCGCTGGA CCGGCCCTCA GCCGCTGACG
CTGGTTGAAG GCACGGATGC AGAATTGCGG CGCAAGCTGG GCGAGGGGCA GGTCGATGTC
ATCCTTACGC TGCTACGCCC CGAGGATGCG GACCGTCCAT CGCTGCGACT GCTGGAGGAG
GGGTATCGCC TGCTCCTGCC GGAAAGCCAC GCCCTGGCAG GGGCTGCGCT GATCGATGCG
CGCGACGTTG CGTCCGAGAC GATGATCGCG CGCCGTTCGT GCGAGATCCT GGGGGAGACC
AGCCGCTGGT TCACCCAACG CGGCGTGCGC CCGCCGTTCT TCCTGCGCTC TTCGAACGAC
GATCGATGCA TCGAGATGGT GCGGGCGGGG ATGGGAGTCA CCACCGCGCC GCAATCGCTG
GCGCGGGACG GAGTCGTGGC GGTACAGCTT GCCGATTACG ATTTCCGGCG GACGCTCGGC
CTTGTCGGCG GACGCGACCG GCCGGACCTT GTGGCAGAGG AGGGCGCGCT TGCCGAAGCG
CTGCGCGCCG CGTTCTACTT CACGGCGTAG
|
|---|
| Protein sequence | MMKRAQLRHF LALVESGNFT RAAERLAISQ PTLSASIAEL ERMAGTRLFL REKRQVRLTA
AGARLVNHAR AIEREFRAAE AAFVEAPVPL APLRLGTIPS VSTAMLSAAV RRWTGPQPLT
LVEGTDAELR RKLGEGQVDV ILTLLRPEDA DRPSLRLLEE GYRLLLPESH ALAGAALIDA
RDVASETMIA RRSCEILGET SRWFTQRGVR PPFFLRSSND DRCIEMVRAG MGVTTAPQSL
ARDGVVAVQL ADYDFRRTLG LVGGRDRPDL VAEEGALAEA LRAAFYFTA
|
|---|
| |