Gene Saro_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1632 
Symbol 
ID3918741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1707602 
End bp1709143 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content62% 
IMG OID640444373 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_496906 
Protein GI87199649 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00192996 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGCGC TCCGCCTTAA GCTGTGGATG ACGCTCGCCT TCGTCATGCT GACAGTGGCA 
GTGCCCGGCG TTATCGCGCG CCATGCGCTC GGCGTCGTAC GCGCACAGCA TGCCCGCTCC
GAAGCCTCAT CCCAGTCGCT CAGCGCATTC CAGCGCCTCG CCGTGCTCGG CTACACGCTG
CAGCAGGAAC GCTACGTCGA TCCGGAAGGC TTTGCGAAGG ACCGCCTGCT GTACATCGAC
GGAGTCCGTT CGCACGTCAC AAATGCTGAA CGGTACATCA ATGCCGAAAT CCGCCTGATC
AGCGAAACCC CGCTCGATCG CCGCAACCGG GCCAAATCCA TCGAGGAAGA AGTCAAGCAG
CGGGCGAAGC TTCACGTGAT CGGGGCCAAC CTGGAAAAGT CGCTCATGGG CGACGGCCGG
GAGACTCTGT GGGAAGACCT AGTCTTCGAA GCCATCAAGG TCGAAGAACG CGAAGCAAAG
GAATACCAGC GCAGCTCCAT CGAAACCTTC CAGAGCGTGT CCGACACCCT GTTCCTTACG
GTGTCGGTCG TTGGCATATT CGGCATTCTT GCCCTCATAT GGGGTCAGCG CCAGGTCATC
CGCCCGCTCG GCGCATTGTG GCGCGGCACG CGGGAAATGG CCGAAGGCCG CTACGATCGC
CGCGTCCCGG TCGTCGGCAC AACCGAGTTT CGTACCATCG CCAACAGCTT CAACACGATG
GCCGCGCGCG TCGAAGAAGC CGCCTTGTCG ATGCAGCGTA CGAACGAGGA ACTGGAACGT
GCGGTTGCGC GCCGGACATC CGAACTCGCC ACGACCAACC GCTCCCTCGA ACGGGCGAAC
CGGCTGCGGC GGCAATTCCT GGCCGATGCC AGCCACGAAT TGCGCACGCC CCTGTCGATC
ATGCGCAGCG AAGCCGAAAT CACACTGCGC AAGGCGGATG CGGACATGGA CGAACTCAGG
ACCGGGCTCG ACCGCGTGGT TCGGCTTTCC GCGCTCATGG CCGAAATGAT CGAAGACATG
TTGCAGGTCG CCCGTGCCGA AGAGCCGATG CTGCAGACCG TCATCGCGCC ATTCGATGTG
GTTGCCGCAA CACGCACCTG CATCGACGAT TTCCACCGCG TGATCGAGGA TGATGGCGGA
CAGATCATCC TGACCGAATG CCCCGATGCA CTGATCGTCG AAGGCGATGC GGTCCGCCTG
CAACAGGTGA TCCGCATCGT CGTGGACAAT GCCGTGTGCT ATTCCTCACA TGCACCTCAC
GTGGAAGTCG CTATCCGTCA GGAAGAGGGC GACGCGGTAA TCGAGGTGTC GGACCAGGGG
GACGGCATCC CCGCCGAAGA CATTCCCCAC CTGTTCCAGC GCTTCCGTCG CGGCAGCCGC
AAAGTCGGCA GTGGCCAGGG CCTCGGCCTT TCCATTGCCA GGTCCATTCT GGAAGCGCTC
GGTGGCACGA TCAGCCTAGA GAGCCGGCTC CATGAAGGAA CCCGGGTATC GATACGTCTC
CCCCTCCCGC CAAGCGGGAC GGCACATGGA ATCATCGCAT GA
 
Protein sequence
MNALRLKLWM TLAFVMLTVA VPGVIARHAL GVVRAQHARS EASSQSLSAF QRLAVLGYTL 
QQERYVDPEG FAKDRLLYID GVRSHVTNAE RYINAEIRLI SETPLDRRNR AKSIEEEVKQ
RAKLHVIGAN LEKSLMGDGR ETLWEDLVFE AIKVEEREAK EYQRSSIETF QSVSDTLFLT
VSVVGIFGIL ALIWGQRQVI RPLGALWRGT REMAEGRYDR RVPVVGTTEF RTIANSFNTM
AARVEEAALS MQRTNEELER AVARRTSELA TTNRSLERAN RLRRQFLADA SHELRTPLSI
MRSEAEITLR KADADMDELR TGLDRVVRLS ALMAEMIEDM LQVARAEEPM LQTVIAPFDV
VAATRTCIDD FHRVIEDDGG QIILTECPDA LIVEGDAVRL QQVIRIVVDN AVCYSSHAPH
VEVAIRQEEG DAVIEVSDQG DGIPAEDIPH LFQRFRRGSR KVGSGQGLGL SIARSILEAL
GGTISLESRL HEGTRVSIRL PLPPSGTAHG IIA