Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1632 |
Symbol | |
ID | 3918741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1707602 |
End bp | 1709143 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640444373 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_496906 |
Protein GI | 87199649 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00192996 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGCGC TCCGCCTTAA GCTGTGGATG ACGCTCGCCT TCGTCATGCT GACAGTGGCA GTGCCCGGCG TTATCGCGCG CCATGCGCTC GGCGTCGTAC GCGCACAGCA TGCCCGCTCC GAAGCCTCAT CCCAGTCGCT CAGCGCATTC CAGCGCCTCG CCGTGCTCGG CTACACGCTG CAGCAGGAAC GCTACGTCGA TCCGGAAGGC TTTGCGAAGG ACCGCCTGCT GTACATCGAC GGAGTCCGTT CGCACGTCAC AAATGCTGAA CGGTACATCA ATGCCGAAAT CCGCCTGATC AGCGAAACCC CGCTCGATCG CCGCAACCGG GCCAAATCCA TCGAGGAAGA AGTCAAGCAG CGGGCGAAGC TTCACGTGAT CGGGGCCAAC CTGGAAAAGT CGCTCATGGG CGACGGCCGG GAGACTCTGT GGGAAGACCT AGTCTTCGAA GCCATCAAGG TCGAAGAACG CGAAGCAAAG GAATACCAGC GCAGCTCCAT CGAAACCTTC CAGAGCGTGT CCGACACCCT GTTCCTTACG GTGTCGGTCG TTGGCATATT CGGCATTCTT GCCCTCATAT GGGGTCAGCG CCAGGTCATC CGCCCGCTCG GCGCATTGTG GCGCGGCACG CGGGAAATGG CCGAAGGCCG CTACGATCGC CGCGTCCCGG TCGTCGGCAC AACCGAGTTT CGTACCATCG CCAACAGCTT CAACACGATG GCCGCGCGCG TCGAAGAAGC CGCCTTGTCG ATGCAGCGTA CGAACGAGGA ACTGGAACGT GCGGTTGCGC GCCGGACATC CGAACTCGCC ACGACCAACC GCTCCCTCGA ACGGGCGAAC CGGCTGCGGC GGCAATTCCT GGCCGATGCC AGCCACGAAT TGCGCACGCC CCTGTCGATC ATGCGCAGCG AAGCCGAAAT CACACTGCGC AAGGCGGATG CGGACATGGA CGAACTCAGG ACCGGGCTCG ACCGCGTGGT TCGGCTTTCC GCGCTCATGG CCGAAATGAT CGAAGACATG TTGCAGGTCG CCCGTGCCGA AGAGCCGATG CTGCAGACCG TCATCGCGCC ATTCGATGTG GTTGCCGCAA CACGCACCTG CATCGACGAT TTCCACCGCG TGATCGAGGA TGATGGCGGA CAGATCATCC TGACCGAATG CCCCGATGCA CTGATCGTCG AAGGCGATGC GGTCCGCCTG CAACAGGTGA TCCGCATCGT CGTGGACAAT GCCGTGTGCT ATTCCTCACA TGCACCTCAC GTGGAAGTCG CTATCCGTCA GGAAGAGGGC GACGCGGTAA TCGAGGTGTC GGACCAGGGG GACGGCATCC CCGCCGAAGA CATTCCCCAC CTGTTCCAGC GCTTCCGTCG CGGCAGCCGC AAAGTCGGCA GTGGCCAGGG CCTCGGCCTT TCCATTGCCA GGTCCATTCT GGAAGCGCTC GGTGGCACGA TCAGCCTAGA GAGCCGGCTC CATGAAGGAA CCCGGGTATC GATACGTCTC CCCCTCCCGC CAAGCGGGAC GGCACATGGA ATCATCGCAT GA
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Protein sequence | MNALRLKLWM TLAFVMLTVA VPGVIARHAL GVVRAQHARS EASSQSLSAF QRLAVLGYTL QQERYVDPEG FAKDRLLYID GVRSHVTNAE RYINAEIRLI SETPLDRRNR AKSIEEEVKQ RAKLHVIGAN LEKSLMGDGR ETLWEDLVFE AIKVEEREAK EYQRSSIETF QSVSDTLFLT VSVVGIFGIL ALIWGQRQVI RPLGALWRGT REMAEGRYDR RVPVVGTTEF RTIANSFNTM AARVEEAALS MQRTNEELER AVARRTSELA TTNRSLERAN RLRRQFLADA SHELRTPLSI MRSEAEITLR KADADMDELR TGLDRVVRLS ALMAEMIEDM LQVARAEEPM LQTVIAPFDV VAATRTCIDD FHRVIEDDGG QIILTECPDA LIVEGDAVRL QQVIRIVVDN AVCYSSHAPH VEVAIRQEEG DAVIEVSDQG DGIPAEDIPH LFQRFRRGSR KVGSGQGLGL SIARSILEAL GGTISLESRL HEGTRVSIRL PLPPSGTAHG IIA
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