Gene Saro_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1618 
Symbol 
ID3918726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1687215 
End bp1688267 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content65% 
IMG OID640444358 
ProductUDP-galactose 4-epimerase 
Protein accessionYP_496892 
Protein GI87199635 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTTCG ATGGATCGTC CGAACGCCGC GGCTCGATAC TGGTTACGGG CGGTGCAGGC 
TACATCGGCA GTCACGCGGT ACTCGCCTTG CTGGATGCTG GGTGGCCGGT CATCGTGCTC
GATAACCTGA CCACCGGCTT TCGCTGGGCG GTCGACCCGC GGGCAAGCTT CGTCGAAGGC
GACGTCACGG ACAGCGCCCT TGTGCGCTCT ATCCTGACCT ATCACGAAGT CGCCGCGATC
ATGCATTTCG CAGGGTCGGT GGTGGTACCG GAATCCGTCG TCGATCCGCT CAAGTATTAC
GGCAACAACA CGGCCGCGAC CTGTTCGTTG CTTCGAAACG CGGTGGATTG CGGAGTACCG
CACATCGTAT TCTCCTCGAC TGCCGCAACC TACGGCAGTC CAGACGTGGC GCAGGTCTGC
GAGAATACGC CCACCCGGCC GATCAATCCC TATGGCCGCT CGAAGCTGGT GGTGGAGGCG
ATGCTCGCCG ATGCCGCTGC CGCATATCCG ATCAACTACT GTGCGCTGCG CTACTTCAAT
GTGGCGGGCG CCGATCCGGC CGGACGAACC GGACAATCGA CGGCCGGCGC GACGCATCTC
ATCAAGGTCT GCGTCGAGGC GGCGCTTGGG CGGCGCGAGC TGGTCGAGGT CTATGGCACG
GATTATGACA CCCACGACGG CACCGGCGTG CGCGACTACA TCCATGTCAG CGACCTGGCC
GACGCGCACG TTCACGCGCT GCACCTGCTG ATGGACGATC CCGAGGCCAG CCACACCATG
AACTGCGGCT ATGGCACCGG CTTTTCGGTG CTGGACGTCC TCGACGCGGT CGAGCGCATC
TCCGGCCGCG AGATCCGACG GGTCATGCGC CCTCGGCGTC CTGGCGACCC GGCTGCGCTG
ATCGCCGACA ATAACCTGAT CCTGTCTCGC ACGCGCTGGC GCCCCCGCCA CGCCCGGCTC
GGGGATATCG TGCGCCATGC TCTCGCCTGG GAAGACCAGC TTGCTCGGCG TAAGCCTGGT
CAACCTGTCG GCCAGCGCGA AATCGCCGCC TGA
 
Protein sequence
MIFDGSSERR GSILVTGGAG YIGSHAVLAL LDAGWPVIVL DNLTTGFRWA VDPRASFVEG 
DVTDSALVRS ILTYHEVAAI MHFAGSVVVP ESVVDPLKYY GNNTAATCSL LRNAVDCGVP
HIVFSSTAAT YGSPDVAQVC ENTPTRPINP YGRSKLVVEA MLADAAAAYP INYCALRYFN
VAGADPAGRT GQSTAGATHL IKVCVEAALG RRELVEVYGT DYDTHDGTGV RDYIHVSDLA
DAHVHALHLL MDDPEASHTM NCGYGTGFSV LDVLDAVERI SGREIRRVMR PRRPGDPAAL
IADNNLILSR TRWRPRHARL GDIVRHALAW EDQLARRKPG QPVGQREIAA