Gene Saro_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1610 
Symbol 
ID3918718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1677803 
End bp1679017 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content67% 
IMG OID640444350 
Productmajor facilitator transporter 
Protein accessionYP_496884 
Protein GI87199627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGGCC CCTTTGGCGA GCATGACCGT CGCGACCGGC GGTTTCTCGC CCTTTACGCC 
CTGGCCTGGG CAGGCGCCAC CATTGCCTAT ACGCCATTGC TCACCCTGCT CCTGCCGATG
CACGTGGATG CGCAGGCAGG CGGCGATGGT GTCCGTTGGC TGGCGTTGAC CACCTTTGCC
GGCGCGCTCA CCGCCAGCCT TGGCAATATC CTCTTCGGAT GGTTGAGCGA CCGAAGCGGA
AGACGGCGGC CGTGGGTGCT GACGGGGCTC GGGCTTTCCA GTGCCCTGCT GATGCTTGTG
CCCGAGGTGA AGTCGCTTGC CGCGCTCGCC GGCGTGATCA TGCTCTGGCA GATCGGTCTC
AACATGATGC TCGGGCCGCT GGCCGCATGG GCGGGGGACC GGGTTCCCGA CCGGCGCAAG
GGCCTTCTCG GAGGTCTTCT GGCTTTTGCA CCGGCATCGG GTGCGCTGGC GGGGGCCTTC
GTCACGATAC CGGGCCTTGC CGATCTACCG CAGCGCTTCG ATATCGTTGC CGCGATCGTT
GCCTTGTGCG TACTGCCCCT GGCCATTCTT GGGGAAGATG GCTTTGCCGG GGCTGGGCAG
CCGGAAGTTT CGGACGACAC GCCTGCCGTC GCGGCGGCGC TCCTTCGCGC ATTGGCAACG
CGAATGTGGT TCGCCCGGCT TCTGGTGCAG GTCTCGGAGG CATCGCTCTT CGCCTACTTC
TACTTGTGGC TGCGGACTGT CGATCCCTCA TTTGGCGATG CGGCGATCGC GCGGGTGCTT
CTCGTTGCCA TGCTGATCGG CGCGTTGACC GCGCTGCTCG CCGGGCACTG GGCCGACCGG
CGCGGGCGGC CGGTGACGCC GCTCGTGGTT GCTTCCGGGG GCGGAGCGGT CGGGTTGGTG
GCGATGGCGC TGGCCTCGAA CGCGGCGCAG GCGGTGGCGG GTTACCTTGT GTTCGGGCTG
TCCACGTCCG TGTTCCTCGC GCTCCACAGC GCCCAGACCC TTCGCGTATT GCCCGATGGC
GCACGGCGTG GGCGAAACTT GGGATTGTTC AATCTTACCA ATACCCTACC GTCGCTGGCG
GTCCCGTCGC TCACGCTCAC CCTGGTTCCG GCGCTAGGGT TCTCCGGGCT GTTCCTGGCC
TTGGCGGCGC TTTCCCTGCT GGCGCTTGTG CTTCTCGTCC GGGCGCCGTC CTCCACGCTT
CGTCGCGAAG GCTGA
 
Protein sequence
MHGPFGEHDR RDRRFLALYA LAWAGATIAY TPLLTLLLPM HVDAQAGGDG VRWLALTTFA 
GALTASLGNI LFGWLSDRSG RRRPWVLTGL GLSSALLMLV PEVKSLAALA GVIMLWQIGL
NMMLGPLAAW AGDRVPDRRK GLLGGLLAFA PASGALAGAF VTIPGLADLP QRFDIVAAIV
ALCVLPLAIL GEDGFAGAGQ PEVSDDTPAV AAALLRALAT RMWFARLLVQ VSEASLFAYF
YLWLRTVDPS FGDAAIARVL LVAMLIGALT ALLAGHWADR RGRPVTPLVV ASGGGAVGLV
AMALASNAAQ AVAGYLVFGL STSVFLALHS AQTLRVLPDG ARRGRNLGLF NLTNTLPSLA
VPSLTLTLVP ALGFSGLFLA LAALSLLALV LLVRAPSSTL RREG