Gene Saro_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1597 
Symbol 
ID3918705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1659381 
End bp1662014 
Gene Length2634 bp 
Protein Length877 aa 
Translation table11 
GC content67% 
IMG OID640444337 
Producthypothetical protein 
Protein accessionYP_496871 
Protein GI87199614 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.498807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCC GCCTGACCGT CACCCCGCGC CAGCGCCGCA TTCTGGCCAG CCTATTCGTG 
CTGCTCCTCG CCGCCGTCGC ATTTGTCGCT CTCGACCGGC TGACGCACGA AGTCCGCTAC
GCCGACGTCC GCCAGGCACT CCACGCCCTC ACCCCCGCAC GGCTGGCCGC GGCCATCGGC
CTTACGGCAG GAAGCTACCT CGCGCTTACC TTCTACGATC ACGTGGCGCT GCGGGTGATC
GGGCAATCGC TGCCATGGAA GACCGCCGCC CTGGCCTCTT TCACAAGCTA CACGCTCAGC
CACAATCTCG GCCTCGGCCT CATCACGGGC AGCTCGGCTC GCTACCGGGT CTATATCGCC
GCGGGCCTCG ACGGTCCGGA CATCGCCCGC GTGATCGGCC TGGCGGGCGC CACATTCTGG
TTCAGCGTGG CTGCCGTGAC AGGTCTCGCG CTCCTTTCCG GCACCCCGGT TCAACTCGGC
TGGCTTCCGC TCACTGCATC CCAGACGCGA TTTGCCGGCG CGGGACTTCT TGTCATGCTT
CTTGCCCTCG CGCTGATCCT CACGAGGCGC GGCCATCCCA TCAAGATCCT CGGCGCCAGC
ATTCCGTTGC CGGATGGCCC GGCCATTGTC GCCCAGCTCG CCGCAGGCCT TGTCGACCTT
GCCTGTGCCA GCGCGGCACT CTTCGTCCTG ATCCCCGGGG CGCAGGCGGG AGACTTTCCC
GTGTTCGTTC TGGCTTGGGC GCTAGGAATA GTCGCGGCGC TCTTGACCCA CGTTCCGGGC
GGTCTTGGGA TCTTCGAGGC AACGGTCCTG GCCGTGCTGC CGGGCGGAGA CCGGACCGGG
ATATTCGCCG CTCTCATCGC CTATCGCATC GTCTACTATC TGGCGCCGCT GGCACTGGGC
GTGATGATCC TCGGCTGGCA CGAAGCGCGG CGCATGCGCG GCGTGTCGCG CCTGCTCGGC
GGGCTGCGCG GAATGATCGA CAGCATCCTG CCGTTGCTCC TGGGCTCCGG CGCGTTCCTG
GCCGGATCGA TGCTGCTGCT TTCCGGTGCA CTGCCTCCGG TGGGCTGGCG CATCGGCGCG
TTGGGAACCC TGCTTCCCCT CCCCGTTATC GAAATCAGCC ACATCGCCGC TACAATAGCC
GGCACGGCCC TGCTGCTGAT CGCCCCCGGC CTCTATCGCC GGCTCGATGG CGCGAGCGTT
CTCGCGCGCA TTCTTCTGCT GGCAGGCGCC CTCTTTTCGC TGGGCAAGGG CCTTGACTAC
GAAGAAGCGC TGGTCTGCCT TGGCATGGCC GCCGTACTCC AGGTTGGCAG AGGCGCTTTC
AACCGCCGTA CCGCGCTTAC CGCGCAGCCC ATCGGAGCGG GCTGGATCGT CGCCATCGCT
CTGTCGGCCG CAATGGCAGG CTGGGCAGGT CTCTTCGCAT TCCGCCACGT TCCCTACAGC
GACGCCCTGT GGTGGCGTTT CGCCCTGCGC GCCGATGTTC CACGCTACCT ACGTGCGATG
CTGGCCTGCG CATTCCTGCT GCTCGGCTTT GCGGCGTGGC GAATGCTTGC CCCCGCCGCA
GCGCCCCGCG CGCCCTTGCC GCGCGACGAC GAATGGCAGG TCATCCGCCG CATCCTGGCA
ATCGCCAACC GGACCGAGGC CATGCTCGCA CTTACCGGCG ACAAGCGCTT CATCCTGTCC
GAGGCCGGTG ACGCATTCCT GATGTACCAG GTTCAGGGTG CGAGCTGGAT CGTGATGGGC
GACCCCGTCG GGGCGAGCCA GTCATGGGAG GAACTCCTTT GGCGGATCCG CGACCTGTCG
CACAGCCAGC AAGGACGGCT GATGCTCTAC GAAGCATCGC CCGCAGTCCT CGACATCGCC
ATCGGCCTAG GCATGCAGAT CGTGAAGTAC GGCGAGGAGG CCGTGATCGA TCTTGCCACC
TTTACGCTCG AAACGCCCGA ACTGCGCTCG GTCCGCAAGT CAGAGCGCGG CGCGGCCCGG
GCCGGTGCGA CATTTCGCAT CGTGCCTGCC GCCGCAGTCC CCGTGATCCT CGCGGAACTG
GAAGCGATCT CGGATGAATG GCTGGCCCTG CACGGAGGAC GCGAGAAGGG TTTCAGCCTC
GGCTTCTTCG ACCGCACCTA TGTCCAGTCG TTCGACATGG CGCTGGTCAT GGTCGGCAAC
AGGCCCGTCG CATTCGCCAA CCTGTGGCTC ACCGAGAACA AGGAAGAAGC ATCGGTAGAC
CTCATGCGCC ACACGGCCGA CGCGCCGCGC GGAACGATGG ATTTCCTCTT TGCCAATCTC
CTCCTCTGGG CGCGGGACCA GGGCTATGCG CGCTTCACGC TCGGCATGGT CCCGCTTTCG
GGAATAGAAG GCCGTCGACT GGCGCCGGTC TGGTCAAGGG CGGCGGCGCT GGTCTTCCGG
CATGGCGAAC GTTTCTACGG CTTTCGAGGC CTGCGCGCCT ACAAGGACAA GTTCGCACCC
CGCTGGGAGC CCCGCTACCT CGCCGGGCCG CAGGGCGTCG CGCTCCTCCA GTCGCTGCGC
GACGTGGCGC ATCTCATCGC CAACCCGCAT GTGCCGCCCC GGCCGCTGCC TTCGACCGCA
AAGGCCGAAC CGGGCGCGAT CAAGGCCGTA CCTTTCGCGG AGCAGGCAGC ATGA
 
Protein sequence
MNRRLTVTPR QRRILASLFV LLLAAVAFVA LDRLTHEVRY ADVRQALHAL TPARLAAAIG 
LTAGSYLALT FYDHVALRVI GQSLPWKTAA LASFTSYTLS HNLGLGLITG SSARYRVYIA
AGLDGPDIAR VIGLAGATFW FSVAAVTGLA LLSGTPVQLG WLPLTASQTR FAGAGLLVML
LALALILTRR GHPIKILGAS IPLPDGPAIV AQLAAGLVDL ACASAALFVL IPGAQAGDFP
VFVLAWALGI VAALLTHVPG GLGIFEATVL AVLPGGDRTG IFAALIAYRI VYYLAPLALG
VMILGWHEAR RMRGVSRLLG GLRGMIDSIL PLLLGSGAFL AGSMLLLSGA LPPVGWRIGA
LGTLLPLPVI EISHIAATIA GTALLLIAPG LYRRLDGASV LARILLLAGA LFSLGKGLDY
EEALVCLGMA AVLQVGRGAF NRRTALTAQP IGAGWIVAIA LSAAMAGWAG LFAFRHVPYS
DALWWRFALR ADVPRYLRAM LACAFLLLGF AAWRMLAPAA APRAPLPRDD EWQVIRRILA
IANRTEAMLA LTGDKRFILS EAGDAFLMYQ VQGASWIVMG DPVGASQSWE ELLWRIRDLS
HSQQGRLMLY EASPAVLDIA IGLGMQIVKY GEEAVIDLAT FTLETPELRS VRKSERGAAR
AGATFRIVPA AAVPVILAEL EAISDEWLAL HGGREKGFSL GFFDRTYVQS FDMALVMVGN
RPVAFANLWL TENKEEASVD LMRHTADAPR GTMDFLFANL LLWARDQGYA RFTLGMVPLS
GIEGRRLAPV WSRAAALVFR HGERFYGFRG LRAYKDKFAP RWEPRYLAGP QGVALLQSLR
DVAHLIANPH VPPRPLPSTA KAEPGAIKAV PFAEQAA