Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1597 |
Symbol | |
ID | 3918705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1659381 |
End bp | 1662014 |
Gene Length | 2634 bp |
Protein Length | 877 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640444337 |
Product | hypothetical protein |
Protein accession | YP_496871 |
Protein GI | 87199614 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.498807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCGCC GCCTGACCGT CACCCCGCGC CAGCGCCGCA TTCTGGCCAG CCTATTCGTG CTGCTCCTCG CCGCCGTCGC ATTTGTCGCT CTCGACCGGC TGACGCACGA AGTCCGCTAC GCCGACGTCC GCCAGGCACT CCACGCCCTC ACCCCCGCAC GGCTGGCCGC GGCCATCGGC CTTACGGCAG GAAGCTACCT CGCGCTTACC TTCTACGATC ACGTGGCGCT GCGGGTGATC GGGCAATCGC TGCCATGGAA GACCGCCGCC CTGGCCTCTT TCACAAGCTA CACGCTCAGC CACAATCTCG GCCTCGGCCT CATCACGGGC AGCTCGGCTC GCTACCGGGT CTATATCGCC GCGGGCCTCG ACGGTCCGGA CATCGCCCGC GTGATCGGCC TGGCGGGCGC CACATTCTGG TTCAGCGTGG CTGCCGTGAC AGGTCTCGCG CTCCTTTCCG GCACCCCGGT TCAACTCGGC TGGCTTCCGC TCACTGCATC CCAGACGCGA TTTGCCGGCG CGGGACTTCT TGTCATGCTT CTTGCCCTCG CGCTGATCCT CACGAGGCGC GGCCATCCCA TCAAGATCCT CGGCGCCAGC ATTCCGTTGC CGGATGGCCC GGCCATTGTC GCCCAGCTCG CCGCAGGCCT TGTCGACCTT GCCTGTGCCA GCGCGGCACT CTTCGTCCTG ATCCCCGGGG CGCAGGCGGG AGACTTTCCC GTGTTCGTTC TGGCTTGGGC GCTAGGAATA GTCGCGGCGC TCTTGACCCA CGTTCCGGGC GGTCTTGGGA TCTTCGAGGC AACGGTCCTG GCCGTGCTGC CGGGCGGAGA CCGGACCGGG ATATTCGCCG CTCTCATCGC CTATCGCATC GTCTACTATC TGGCGCCGCT GGCACTGGGC GTGATGATCC TCGGCTGGCA CGAAGCGCGG CGCATGCGCG GCGTGTCGCG CCTGCTCGGC GGGCTGCGCG GAATGATCGA CAGCATCCTG CCGTTGCTCC TGGGCTCCGG CGCGTTCCTG GCCGGATCGA TGCTGCTGCT TTCCGGTGCA CTGCCTCCGG TGGGCTGGCG CATCGGCGCG TTGGGAACCC TGCTTCCCCT CCCCGTTATC GAAATCAGCC ACATCGCCGC TACAATAGCC GGCACGGCCC TGCTGCTGAT CGCCCCCGGC CTCTATCGCC GGCTCGATGG CGCGAGCGTT CTCGCGCGCA TTCTTCTGCT GGCAGGCGCC CTCTTTTCGC TGGGCAAGGG CCTTGACTAC GAAGAAGCGC TGGTCTGCCT TGGCATGGCC GCCGTACTCC AGGTTGGCAG AGGCGCTTTC AACCGCCGTA CCGCGCTTAC CGCGCAGCCC ATCGGAGCGG GCTGGATCGT CGCCATCGCT CTGTCGGCCG CAATGGCAGG CTGGGCAGGT CTCTTCGCAT TCCGCCACGT TCCCTACAGC GACGCCCTGT GGTGGCGTTT CGCCCTGCGC GCCGATGTTC CACGCTACCT ACGTGCGATG CTGGCCTGCG CATTCCTGCT GCTCGGCTTT GCGGCGTGGC GAATGCTTGC CCCCGCCGCA GCGCCCCGCG CGCCCTTGCC GCGCGACGAC GAATGGCAGG TCATCCGCCG CATCCTGGCA ATCGCCAACC GGACCGAGGC CATGCTCGCA CTTACCGGCG ACAAGCGCTT CATCCTGTCC GAGGCCGGTG ACGCATTCCT GATGTACCAG GTTCAGGGTG CGAGCTGGAT CGTGATGGGC GACCCCGTCG GGGCGAGCCA GTCATGGGAG GAACTCCTTT GGCGGATCCG CGACCTGTCG CACAGCCAGC AAGGACGGCT GATGCTCTAC GAAGCATCGC CCGCAGTCCT CGACATCGCC ATCGGCCTAG GCATGCAGAT CGTGAAGTAC GGCGAGGAGG CCGTGATCGA TCTTGCCACC TTTACGCTCG AAACGCCCGA ACTGCGCTCG GTCCGCAAGT CAGAGCGCGG CGCGGCCCGG GCCGGTGCGA CATTTCGCAT CGTGCCTGCC GCCGCAGTCC CCGTGATCCT CGCGGAACTG GAAGCGATCT CGGATGAATG GCTGGCCCTG CACGGAGGAC GCGAGAAGGG TTTCAGCCTC GGCTTCTTCG ACCGCACCTA TGTCCAGTCG TTCGACATGG CGCTGGTCAT GGTCGGCAAC AGGCCCGTCG CATTCGCCAA CCTGTGGCTC ACCGAGAACA AGGAAGAAGC ATCGGTAGAC CTCATGCGCC ACACGGCCGA CGCGCCGCGC GGAACGATGG ATTTCCTCTT TGCCAATCTC CTCCTCTGGG CGCGGGACCA GGGCTATGCG CGCTTCACGC TCGGCATGGT CCCGCTTTCG GGAATAGAAG GCCGTCGACT GGCGCCGGTC TGGTCAAGGG CGGCGGCGCT GGTCTTCCGG CATGGCGAAC GTTTCTACGG CTTTCGAGGC CTGCGCGCCT ACAAGGACAA GTTCGCACCC CGCTGGGAGC CCCGCTACCT CGCCGGGCCG CAGGGCGTCG CGCTCCTCCA GTCGCTGCGC GACGTGGCGC ATCTCATCGC CAACCCGCAT GTGCCGCCCC GGCCGCTGCC TTCGACCGCA AAGGCCGAAC CGGGCGCGAT CAAGGCCGTA CCTTTCGCGG AGCAGGCAGC ATGA
|
Protein sequence | MNRRLTVTPR QRRILASLFV LLLAAVAFVA LDRLTHEVRY ADVRQALHAL TPARLAAAIG LTAGSYLALT FYDHVALRVI GQSLPWKTAA LASFTSYTLS HNLGLGLITG SSARYRVYIA AGLDGPDIAR VIGLAGATFW FSVAAVTGLA LLSGTPVQLG WLPLTASQTR FAGAGLLVML LALALILTRR GHPIKILGAS IPLPDGPAIV AQLAAGLVDL ACASAALFVL IPGAQAGDFP VFVLAWALGI VAALLTHVPG GLGIFEATVL AVLPGGDRTG IFAALIAYRI VYYLAPLALG VMILGWHEAR RMRGVSRLLG GLRGMIDSIL PLLLGSGAFL AGSMLLLSGA LPPVGWRIGA LGTLLPLPVI EISHIAATIA GTALLLIAPG LYRRLDGASV LARILLLAGA LFSLGKGLDY EEALVCLGMA AVLQVGRGAF NRRTALTAQP IGAGWIVAIA LSAAMAGWAG LFAFRHVPYS DALWWRFALR ADVPRYLRAM LACAFLLLGF AAWRMLAPAA APRAPLPRDD EWQVIRRILA IANRTEAMLA LTGDKRFILS EAGDAFLMYQ VQGASWIVMG DPVGASQSWE ELLWRIRDLS HSQQGRLMLY EASPAVLDIA IGLGMQIVKY GEEAVIDLAT FTLETPELRS VRKSERGAAR AGATFRIVPA AAVPVILAEL EAISDEWLAL HGGREKGFSL GFFDRTYVQS FDMALVMVGN RPVAFANLWL TENKEEASVD LMRHTADAPR GTMDFLFANL LLWARDQGYA RFTLGMVPLS GIEGRRLAPV WSRAAALVFR HGERFYGFRG LRAYKDKFAP RWEPRYLAGP QGVALLQSLR DVAHLIANPH VPPRPLPSTA KAEPGAIKAV PFAEQAA
|
| |