Gene Saro_1471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1471 
Symbol 
ID3916136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp1511678 
End bp1512337 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content58% 
IMG OID640444214 
ProductTetR family transcriptional regulator 
Protein accessionYP_496748 
Protein GI87199491 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAAAG TCAGCAATAT CTCCCGACGG CGTCGTTCGG CTCAGACAGA GGGTGGCGCC 
GATTATACCG CCAAACGAGA GGAACTTGTC CGGATCGCGG CCCGCCTGTT CAAGGAACAA 
GGCTACCAGT CTACCAAGCT GGCTGAGATC GCTCGCGAGG CCGGGCTCGA CCGCGCCACG 
ATTTATTATT ACGTCGGCAG CAAGGAAGAG CTGTTCCGCG AAACGGTCGA AGGCGTGCTT 
GATGACATCA GCGCCGAAGC CAAACGCCTG CTTGCCGACC AGAGCCTGAC CTGGCGAGAA 
CGCCTGCATG CCATCTACGT CAGGCTGATG GCCTCGTATG AGGAGAATTA TCCGGCAACC 
TTCGTGTACA TCAAGGAACA GATGCACGAA GTTGCGGCTG AAGAATCGAT CTGGGCGCAG 
GAGATCATGA GAAAAACGCG CGCGTTCGAC CAAGTGCTTA TCAACCTCAT TCGTGAGGCC 
ATTGCCGCCG GCGAGCTGCG CTCGAATATC CCGCCTCGCT TGGTGGAGCA CGCCCTGTTT 
GGCATGCTGA ACTGGTCTCA CCGCTGGTTT ACGCCTGGCG GTCCGATGAC TGGCGCGCAA 
GTAGCCGAAG CGTTCTGGTC GATTTTCATC GACGGTATGA ACCCCGAAAA GGGGAACTGA
 
Protein sequence
MSKVSNISRR RRSAQTEGGA DYTAKREELV RIAARLFKEQ GYQSTKLAEI AREAGLDRAT 
IYYYVGSKEE LFRETVEGVL DDISAEAKRL LADQSLTWRE RLHAIYVRLM ASYEENYPAT 
FVYIKEQMHE VAAEESIWAQ EIMRKTRAFD QVLINLIREA IAAGELRSNI PPRLVEHALF 
GMLNWSHRWF TPGGPMTGAQ VAEAFWSIFI DGMNPEKGN