Gene Saro_1384 details

Gene Information

• Locus tag: Saro_1384
• ID: 3917838
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1429739
• End bp: 1430173
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640444126
• Product: general secretion pathway protein I
• Protein accession: YP_496662
• Protein GI: 87199405
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4967] Tfp pilus assembly protein PilV
• TIGRFAM ID: [TIGR01707] general secretion pathway protein I; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.35215
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGCTG ACAACAGGCC CCCGATCCGC GCTCCGATCC GCGCCCCGAT CCGGGCCCCG 
ATCCGCGCCC ACGCCAACGG CTTCACCCTG CTCGAGCTTC TGGTCGCGCT CGCGGTCTTT 
GCCATCGCAG CCCTGGCGCT GCTCCAGATG GAGGGCGCCA GCATTGCGCG AACCGCGGAC 
CTCGACCAGC GCCTGCTGCG CGAGATCGTC GCACAGAACA TGGCGGCCGA GATCCTGAGC 
GATCCCGCCC CGCCGCCGGT CGGCTCGGCC AGCGGGACCA TCGAGAATGC CGGCCGCCGC 
TTCCAGTGGA CGCGCACCGT TGCGCGACGG GCTGACTTCG GCGTTCTGGG GATCACCCTT 
TCCGTCCGCG AGACGACGCC GGGTGCGCAG AGCCAGGCCT TTTCGCTCGA TTTCACCCGG 
CTCCCCGCGG CATGA 

 

Protein sequence

MPADNRPPIR APIRAPIRAP IRAHANGFTL LELLVALAVF AIAALALLQM EGASIARTAD 
LDQRLLREIV AQNMAAEILS DPAPPPVGSA SGTIENAGRR FQWTRTVARR ADFGVLGITL 
SVRETTPGAQ SQAFSLDFTR LPAA