| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1374 |
|---|
| Symbol | |
|---|
| ID | 3917828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1420471 |
|---|
| End bp | 1421217 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640444116 |
|---|
| Product | phosphatidate cytidylyltransferase |
|---|
| Protein accession | YP_496652 |
|---|
| Protein GI | 87199395 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0575] CDP-diglyceride synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.19741 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACGTTG AGCCGACCCT GACACCGCCG GGACCCGCTC CCGTGAAGAA ATCGGACCTG
CCCGTCCGCA TCGTTTCTGC CGTGATCATG CTGGCGATCG CCGGAACCGC GCTTTGGTTC
GGTGGCGTGG TGCTGGACCT TTTCGTGGCT GTCGTGGCGT TTGGCGTCTT CGTCGAATAT
GTGCGGCTGG CAAGCAAGTT TGCCGAGAAC CCGGCGCGAC TCGCATCGAT GGTCATTTCC
GGCGCAATCT ACATCGGCTG GGGTGCGCTG GCTCTGGTCG TGATGCCCGA AGCGCTGCTG
ATCGCGACGA TGGGCCTTGT GATCTGCACC GATACCGGGG CCTACTTCAC CGGTCGTGCA
ATCGGCGGCC CGAAGATCGC TCCTAGGATC AGTCCTTCGA AGACATGGTC CGGGCTGGCC
GGCGGCATGG CGGCGGCTGG CGTCTGGGCG GCGGTCGTAG TGCTGACGGC GGGCTACCTG
CTTTCCGCCA TCGGGCCAAC CGGGCCAAGT CTTGGCGCCG CGATTGAGGT GGCAAACGTG
GGCGTTGCCG CAATCGCCGG GGCGGTGCTG GCGGTTTTCG CGCAAGTGGG CGACTTCTTC
GAATCCTGGC TCAAGCGCCG GGCTGGCGTG AAGGACTCCT CGCGCCTGAT ACCTGGCCAC
GGAGGCCTGT TCGACCGCGT TGACGGATTG CTCCCGGTTG CGATCATTGT CGGGACGTCA
TGGGCCGCCA CGCAGGCTGG ACTGTAA
|
|---|
| Protein sequence | MDVEPTLTPP GPAPVKKSDL PVRIVSAVIM LAIAGTALWF GGVVLDLFVA VVAFGVFVEY
VRLASKFAEN PARLASMVIS GAIYIGWGAL ALVVMPEALL IATMGLVICT DTGAYFTGRA
IGGPKIAPRI SPSKTWSGLA GGMAAAGVWA AVVVLTAGYL LSAIGPTGPS LGAAIEVANV
GVAAIAGAVL AVFAQVGDFF ESWLKRRAGV KDSSRLIPGH GGLFDRVDGL LPVAIIVGTS
WAATQAGL
|
|---|
| |