Gene Saro_1268 details

Gene Information

• Locus tag: Saro_1268
• Symbol: rplO
• ID: 3917899
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1307618
• End bp: 1308133
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640444004
• Product: 50S ribosomal protein L15
• Protein accession: YP_496546
• Protein GI: 161760695
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.11537
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTGA ACGAAATCTC CGACAACAAT GGCGCCCGCA AGGGTCGCAT GCGCGTTGGC 
CGTGGCATCG GCTCGGGCAA GGGCAAGACC GCCGGTCGCG GCCAGAAGGG CGCCAAGGCG 
CGTTCGGGCG TCAGCATCAA TGGCTTCGAG GGCGGCCAGA TGCCGCTCCA CATGCGTCTG 
CCGAAGCGCG GCTTCAACAA CATCTTCGCC AAGGACTACG CTGAAGTTAA CCTCGGCATG 
GTCCAGCGGG TGATCGACGC AGGCAAGCTC GACATCTCGG GCACCGTCGA CCACGCAGCG 
CTCAAGGCCG CTGGCCTGGC CCGTGGCGGC AAGGATGGCG TGCGCCTCCT CGCCAAGGGC 
GAACTGACCT CCAAGGTCGC GTTCAAGGTT GCCGGTGCCT CGAAGGGCGC TTTCGCCGCG 
GTCGAGAAGG CCGGCGGTTC GATCGCTCTG CCCGAAGCGC AGCCCAGCGA GCAGGAAAAG 
AAGGCTGCTC GCCGCGAAGC GAACAAGGCC AAGTAA 

 

Protein sequence

MKLNEISDNN GARKGRMRVG RGIGSGKGKT AGRGQKGAKA RSGVSINGFE GGQMPLHMRL 
PKRGFNNIFA KDYAEVNLGM VQRVIDAGKL DISGTVDHAA LKAAGLARGG KDGVRLLAKG 
ELTSKVAFKV AGASKGAFAA VEKAGGSIAL PEAQPSEQEK KAARREANKA K