Gene Saro_1256 details

Gene Information

• Locus tag: Saro_1256
• Symbol: rplP
• ID: 3917887
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1302625
• End bp: 1303059
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640443992
• Product: 50S ribosomal protein L16
• Protein accession: YP_496534
• Protein GI: 87199277
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.738534
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCAAC CGAAGAAGAC CAAGTTCCGC AAGGCCTTCA AGGGCCGCAT CCACGGCCTC 
GCCAAGGGTG GTACGGACCT GAACTTCGGC TCCTACGGCC TCAAGGCCCT GGAACCGGAG 
CGCGTCACCG CTCGCCAAAT CGAAGCGGCC CGTCGTGCGA TCACGCGCCA CATCCGCCGT 
CAGGGCCGTC TGTGGATCCG CGTGTTCCCG GACGTGCCGG TTTCGAAGAA GCCCGCCGAA 
GTCCGCCAGG GCAAGGGCAA GGGCTCGATC GAATACTGGG CAGCCCGCGT GAAGCCGGGT 
CGCATCCTGT TCGAACTGGA CGGCGTCCCC GGCCCGCTCG CGGCCGAGGC TTTCAGCCGC 
GCCGCGATGA AGCTGCCGAT CAAGACGAAG GTCGTCGCCC GCCTTGGCGA CACCTCGCAC 
CTTGCCGGCG AGTGA 

 

Protein sequence

MLQPKKTKFR KAFKGRIHGL AKGGTDLNFG SYGLKALEPE RVTARQIEAA RRAITRHIRR 
QGRLWIRVFP DVPVSKKPAE VRQGKGKGSI EYWAARVKPG RILFELDGVP GPLAAEAFSR 
AAMKLPIKTK VVARLGDTSH LAGE