| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1254 |
|---|
| Symbol | rplV |
|---|
| ID | 3917885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1301527 |
|---|
| End bp | 1301904 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640443990 |
|---|
| Product | 50S ribosomal protein L22 |
|---|
| Protein accession | YP_496532 |
|---|
| Protein GI | 87199275 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0091] Ribosomal protein L22 |
|---|
| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0671662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC CTAAGGCACC CCGTCGCGTT GGCGACAAGG AAGCGCTGTC GGTCGGCACG
CAGATCCGTG GTTCGGCCCA GAAGCTGAAC CTGGTCGCTG GCCTCATCCG CGGCAAGCGC
GCCGAAGACG CGATGAACAT CCTCGCGTTC TCGAAGAAGG CGATGGCGGT TGACGCCCGC
AAGGTTCTCG CTTCGGCGAT CGCCAATGCG GAAAACAACC ACAACCTCGA CGTCGACGCT
CTGGTCGTGG CGGAAGCCTC GGTCGGCAAG TCGATCACGA TGAAGCGCTT CCACACCCGT
GGTCGCGGCA AGTCGACCCG CATCCTCAAG CCGTTCTCGC GGCTCCGGAT CGTGGTCCGC
GAAGTTGAGG AGGCCTGA
|
|---|
| Protein sequence | MSKPKAPRRV GDKEALSVGT QIRGSAQKLN LVAGLIRGKR AEDAMNILAF SKKAMAVDAR
KVLASAIANA ENNHNLDVDA LVVAEASVGK SITMKRFHTR GRGKSTRILK PFSRLRIVVR
EVEEA
|
|---|
| |