Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1227 |
Symbol | |
ID | 3916525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1279961 |
End bp | 1280869 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640443964 |
Product | LysR family transcriptional regulator |
Protein accession | YP_496506 |
Protein GI | 87199249 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.268765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTCA AGGGTCTCGA TCTAAACCTG CTCGTCGTGT TCGATGCGCT GATGGAAACG CGCAGCGTGA CCCGCGCGGC GGAGCGGATC GGGTTGACCC AGCCCGCGAC GAGTGCCGCG CTGCGCCGCT TGCGCGACTA TTTCAGGGAC GAGATTGTCG TCGCCGTTGG CAAGCGGATG CATCCCACGC CATTCGCCGA GGCGTTGCAC CCTCAGATAC AGCAGGCCCT GCGCAGGGTC GAGCGGGCGA TCTCGATGCC GACCGAGTTC GATCCGTCGA CGTCGACCCG CCGCTTCCGC ATCATCGGTT CGGACTACAT CATGGTCGCC GTGCTGGTAC CGCTGATCGA ACGCTTCGCC CGCACCGCGC CCGGCGTGCG TATCGAGATC ATCCAGCCCA ACGAACACAG CGTAGCCGAA CTCGAAGCGG GAAGGGCAGA CCTGCTGGTC ACGCCCGAGC CCTTCCTCGC CTCGTGGCAC CCTAGCGAGG TGCTTTTCGA CGAGGAGCAG GTGGTCGTCG GCTGGGCGCA GAACCCGATC TTTGCGCGGG GGGTGACCGC AGACGACTTC TACGCGGCCG GTCATGTGAC CGTCGCGTTC GGCGCGAACC GCACGCCGGC CTTCGCGGAT TCCGCGCTCA GCCGCATGGG GCGCGAGCGG CGGGTCGAGG TGACGGTCGG CAGCTTCGCT TCCGCACCGT GGTTCATTGA AGGCACCTCG CGCCTTGCCG TGCTGCACGA GCGGCTGGTC CGCCAGATCG CACGCCGTTT CAACCTGGCC TGGGCGCGGA TGCCGTTCGA TTTCCCGACC ATGCAGGAAA TGATGCAGTT CCATGAGGCG CGTGCCGAAG ACGCCGGGCT GGCATGGCTT CGTCAGCAGA TGCGCGAGGT CGCTTCCGAG AACGCCTGA
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Protein sequence | MRFKGLDLNL LVVFDALMET RSVTRAAERI GLTQPATSAA LRRLRDYFRD EIVVAVGKRM HPTPFAEALH PQIQQALRRV ERAISMPTEF DPSTSTRRFR IIGSDYIMVA VLVPLIERFA RTAPGVRIEI IQPNEHSVAE LEAGRADLLV TPEPFLASWH PSEVLFDEEQ VVVGWAQNPI FARGVTADDF YAAGHVTVAF GANRTPAFAD SALSRMGRER RVEVTVGSFA SAPWFIEGTS RLAVLHERLV RQIARRFNLA WARMPFDFPT MQEMMQFHEA RAEDAGLAWL RQQMREVASE NA
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