Gene Saro_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1226 
Symbol 
ID3916524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1279093 
End bp1279842 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID640443963 
ProductIclR family transcriptional regulator 
Protein accessionYP_496505 
Protein GI87199248 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.561168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGTC CCGTCCATTC CGTCAGCCAG GCGTTCGCCA TCCTGCGCCA CCTTGCGCAG 
GCCGGCGGGC CGCAGACCTT GACCGACGTC TGTCGCGCGC TCGATCTCAG CCCGTCGAGC
GGCCTCAATC TGCTGCGCAC GCTTCTTGCC GAGCAGGCCA TCACCCGTGA CGCCGATGGC
AAGCGCTATA CGCTCTCACC CGGTTGGCAG GGCCTTGCCG TGCTGCGCGA CGACGCGGCC
ATGGTGATTG CAGCCGTCCG TCCGCTGCTG TCTCGGCTGG CGGAAGAGCA GGATGCCGCC
GTCGGCCTCT GGCAGGTGCA GCCCGGGGAC CGCCTGGCCC TCGTGGCGCT TGGCGAAAGC
GGGGCGGCAA CGCGCATCCA CATGGTCGAG GGGCAGCGCC AGCCGCTCGG TTCGGGAGCC
TCCGGGCGCG CAATTGCCGC TTATGAAAAC CCGGGCGAGA AGGAACTCCA GCGTCGCTTT
GCCAAGGTGC GATGGCGCCG GCCGCTCACT TATCCCGCGT GGGCGCAACA GATCGGTCGT
GCCGCGCGCG ACGGCTATGC AATCGACGAT GGCTTCGGCC ATCCTGGCAT TTGCTCCATC
AGCGCCGTAG TTCCGCCTCA TGCGCCGGGC GACCCGGTCC GGTTCTGCGT CAGCGCGTCG
GTATTCGCTG CGTCGCGCGA TGCGCGGCAG ATCGCGGCGC TGGGCGAAGG CCTGCTGCGC
CTTGCAGCCG ACCCGGCCTT TGCCTTGTGA
 
Protein sequence
MSGPVHSVSQ AFAILRHLAQ AGGPQTLTDV CRALDLSPSS GLNLLRTLLA EQAITRDADG 
KRYTLSPGWQ GLAVLRDDAA MVIAAVRPLL SRLAEEQDAA VGLWQVQPGD RLALVALGES
GAATRIHMVE GQRQPLGSGA SGRAIAAYEN PGEKELQRRF AKVRWRRPLT YPAWAQQIGR
AARDGYAIDD GFGHPGICSI SAVVPPHAPG DPVRFCVSAS VFAASRDARQ IAALGEGLLR
LAADPAFAL