Gene Saro_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1207 
Symbol 
ID3916505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1254345 
End bp1254989 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID640443944 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_496486 
Protein GI87199229 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.262978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGG GACGGCAAGG CGGCTGGAAC CGTCGGGATT TTATTGGCGC GACGGCGTTG 
CTGGCGCTGG CCATCGGGGT GCCGGTGGCG GCCGTCCGGC TGACGCACCT TGATGCCGAA 
GATGCTCCGA GCGACCGGCA GCGCATGGTG ATGAAGGATG TCAGCCAGCT TGTGATCCCG 
CGCACCGGCA CGCCTGGCGC GGGCGAGACG GGGGCCGGGG ACTTTGCGAT TCTCGCGCTC 
GCCCATGGTC TTGACGGGAC GCGCAAGCCG ATGGCTTCGG CGGCGACGCC TGCCTTCGGC 
GCATCGGTCG AGCGTTTTCT GCGCAACGAC GGTTCGCTTC GCCATGTCGC CTGGCTCGAA 
CGCATTCTCG ACGACCGCGC AGGCGGCGAT TTCCTTGGCC GCCCTGTCGC CGAGCGTGGG 
CGCCTGCTGG CAGCGCTCGA CGCCGAAGCC TTTGCCGAGG GCGCGGGCGA GCATCCGTGG 
AAGGCGATCA AGGGCCTGAT CCTGACCGGC TACTACACCG GCGAGGTCGG CGGATCGCAG 
GAACTTCAAT ACGTCCATGT CCCTGGCCGC TTTGATCCGG ACCTGCCGCT GACGCCCGGT 
TTCCGGGCGA TTTCAAGCGA CTGGACCGCA GTGGACTTCG GATAA
 
Protein sequence
MAKGRQGGWN RRDFIGATAL LALAIGVPVA AVRLTHLDAE DAPSDRQRMV MKDVSQLVIP 
RTGTPGAGET GAGDFAILAL AHGLDGTRKP MASAATPAFG ASVERFLRND GSLRHVAWLE 
RILDDRAGGD FLGRPVAERG RLLAALDAEA FAEGAGEHPW KAIKGLILTG YYTGEVGGSQ 
ELQYVHVPGR FDPDLPLTPG FRAISSDWTA VDFG