| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1184 |
|---|
| Symbol | |
|---|
| ID | 3916481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 1225715 |
|---|
| End bp | 1226656 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640443920 |
|---|
| Product | endo alpha-1,4 polygalactosaminidase, putative |
|---|
| Protein accession | YP_496463 |
|---|
| Protein GI | 87199206 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3868] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTGGC ATAGCGCCGC AGCCGCCTCG CAAACGGGGC TTGCCGCCCT TGCCGTGGCA
ATGCTGGCGC TGACCGGCTG CGGGGGCAGC GACGGCGGGT CACCGACACC GACGCCCACG
GTAACGCCGG CCCCGACACC CACGCCAACG CCAACGCCAA CTCCGACGCC CACCCCGACA
CCAACCCCGA CGCCTACCCC CACTCCCACG CCGGGAGGCC TCGCGAGCTG GGACTGGATA
TTGCAAAGCC AGGGACTCCC GGCCACGCCA CCCGCCGTGG CCTATCTCGA CGTCGACGGC
TTCGATACGC CCAAGAGCTA CGTCACGCTG GCCAAGGCGG CGGGCACGAA GACGATCTGC
TATCTGAACG TCGGCACGGC AGAGAACTTC CGCCCGGACT ATTCCCAGTT TTCCGCGATT
TCGGGCCTGC TCGGCAACAG CTATCCGGGG TTTTCCGGCG AACGCTATAT CGACATCCGG
CGCTATCCCG AGTTCATCCA GATCATGGAC AACCGGCTGG TCATGTGCCG GGACAAGGGC
TTCGACCTTG TCGAATTCGA TGTGATGGAC GCCTTCGAGG ACGGTGCCTC CACGGTGGGC
TTCCCGCTGA CCGAAGCCGA CATGATCGCA TATGTGACCG CCCTGTCCGC GCGGGCGCGG
GGCTATGGGC TGAAGCCGGT GCAGAAGAAT GCAGGCGGTT CCTCGGCAAA GATCGTGACG
CTGTTCGACG CGGTGCTGTT CGAGGATTGC GTTTTGGGCA ACTTCTGCTC GGACGACGCG
CCCTACATCG CCGCGGGCAA GCCGGCGTTC AACGCGGAGT ATCCGGAAAA CTGGGGCAGC
TTCGACCGGG CCAGGGTTTG CGCCACATCC GCAGCGGCGA AGATTTCGAC GATCATCACG
GTTATCGACC TGGACCGCCC GGCGCCGGAT CGATGTACCT GA
|
|---|
| Protein sequence | MSWHSAAAAS QTGLAALAVA MLALTGCGGS DGGSPTPTPT VTPAPTPTPT PTPTPTPTPT
PTPTPTPTPT PGGLASWDWI LQSQGLPATP PAVAYLDVDG FDTPKSYVTL AKAAGTKTIC
YLNVGTAENF RPDYSQFSAI SGLLGNSYPG FSGERYIDIR RYPEFIQIMD NRLVMCRDKG
FDLVEFDVMD AFEDGASTVG FPLTEADMIA YVTALSARAR GYGLKPVQKN AGGSSAKIVT
LFDAVLFEDC VLGNFCSDDA PYIAAGKPAF NAEYPENWGS FDRARVCATS AAAKISTIIT
VIDLDRPAPD RCT
|
|---|
| |