Gene Saro_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1107 
Symbol 
ID3916403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1154865 
End bp1155350 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content67% 
IMG OID640443842 
ProductCHAP 
Protein accessionYP_496386 
Protein GI87199129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00855141 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGTA ACGTGGTCGC AACGCTCCTC GCAGTCTCCG CCTTCGCAGC CCTTCCGGGT 
GCTGCCCATG CGCGTCTCCA GTGCGTGACC TATGCCCGCC AGATCTCCGA CGTGCAGATC
AGCGGCAATG CCCGCGACTG GTGGAGCAAC GCCGAAGGCA GCTACGCCCG TGGCCAGGAG
CCGAAGACCG GCGCCGTCCT CGCGTTCAGC GGCACGAAGG CAATGCCCTA CGGTCACGTC
GCCGTCGTCC GCAAGGTCGT CGATTCCCGC CATATCCTGA TCGACCACGC CAACTGGTCG
GGACCCGGAA TGGTCGAGAA GGGCGTGATG GCGGTCGACG TTTCGTCCGC CGGCGACTGG
AGCGAAGTGC GCGTGTGGTA CGCGCCGACC AAGTCGGTCG GTCTGCGCGC GAGCCCCGCC
AAGGGCTTCA TCTATCCGCG TACGATGACG GCGCAGGCCG ACACGGCAAA GCCCGCCAAG
GGCTGA
 
Protein sequence
MLRNVVATLL AVSAFAALPG AAHARLQCVT YARQISDVQI SGNARDWWSN AEGSYARGQE 
PKTGAVLAFS GTKAMPYGHV AVVRKVVDSR HILIDHANWS GPGMVEKGVM AVDVSSAGDW
SEVRVWYAPT KSVGLRASPA KGFIYPRTMT AQADTAKPAK G