Gene Saro_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1072 
Symbol 
ID3916368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1116409 
End bp1117047 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content61% 
IMG OID640443807 
ProductTetR family transcriptional regulator 
Protein accessionYP_496351 
Protein GI87199094 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0604431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCAG ACGTGCAGAA GGGTGACAAC CTCGAGACGC CGGGCGCGCG CGATCTGCTG 
TTGCAGACGG CGTCGAACAT CATGCGCGAA GGCGATGTCG TGGACATCTC GCTTTCCGAA 
CTCAGTCTGC GCTCGGGCCT CAATTCGGCG CTGGTGAAGT ACTACTTCGG CAACAAGGCG 
GGCCTGCTCA AGGCGCTGCT CGACCGCGAC ATGGAGAACA TCGTCAAGTC GGTCGACGCG 
CTTCTCGCCA AGGACGATAT GAGCCCGGAA GCCAAGCTGC GCCGGCACAT CTCCAAGTGC 
ATCGACACCT ATTACGACTA TCCCTACCTC AACCGGCTGC TCATGCGCCT GGTGCGGGAC 
AGCGACGAGG CCGAGGCCAA GCGCATCGCC GACCAGTACC TCCTGCCGCT GCATCGTGCG 
TACAACCGTT TCATCGGCGA GGGCGTGAAG GCGGGGGTGT TCCGTCCGAT CAACCCGCAA 
CTGTTCTACT TCACGGTCAC GGGCGCCGCA GACCGGTTCT TCTCCGCCCG TCTCGTGCTC 
AAGCACTGTT TCGATCAGGA CACGCTGACG GAGCAACTGC GCGACAGTTA TCGCGAACAT 
ACAGTCGATT TCATCATGGC GGGCATTCTC GCCCACTGA
 
Protein sequence
MSSDVQKGDN LETPGARDLL LQTASNIMRE GDVVDISLSE LSLRSGLNSA LVKYYFGNKA 
GLLKALLDRD MENIVKSVDA LLAKDDMSPE AKLRRHISKC IDTYYDYPYL NRLLMRLVRD 
SDEAEAKRIA DQYLLPLHRA YNRFIGEGVK AGVFRPINPQ LFYFTVTGAA DRFFSARLVL 
KHCFDQDTLT EQLRDSYREH TVDFIMAGIL AH