Gene Saro_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0997 
Symbol 
ID3915779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1040458 
End bp1041885 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content67% 
IMG OID640443731 
ProductNa+/melibiose symporter and related transporters-like 
Protein accessionYP_496276 
Protein GI87199019 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.281913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCGA TACAGGGCAA GGTTCCCACC CGCCTCGCCC TGTTCAACGG GCTTGGCAGC 
GTGGCCTACG GCATCAAGGA CAATGGCTTC GCCACGTTCC TGCTGCTGTT CTACAATCAG
GTCCTGGGCA TGGATGCGCG GCTGGTGAGC CTCGCGCTGC TGATCGCACT GGTGTTCGAC
GGGCTGATCG ATCCGGTCGT CGGTCATATC AGCGATCGCA CGCGCACGCA TTGGGGCCGG
CGACTGCCGT TCCTCTACCT CGCCCCGATC CCGCTGGGCC TGGCCTGGAT ATTCCTGTGG
TCGCCCATCG GCGAGCCAAG CTTCGCGATG CTGCTGATGT CGGCGATCAT GGTGCGCGCG
CTGGTGGCCA TGTGCGAGGT CCCCTCGGCA GCGCTGGTCG CCGAAATCAG TCGCGACTAC
GATGAGCGGA CCCGCCTTAC CCGGTTCCGC TTCCTGTTCT CGTGGGGCGG CGGACTGCTG
ATGCTGCTGC TCGCCTATGG GGTGTTCCTG CCCAACGCCA TGCTGGCGCG CGAGGGATAC
CGCAACTTCG GCCTGTTCGG CGCCGGGCTG ATGGTGGCCT GCGTCCTGCT TTCCGCCATC
GGGCAGCACC GGGCCGTGGC AGGCATGCCT CCCGAGCGCG CGACGGCGGA CAAGGGCGCC
CTCGCCTCGC TGGGCGAGAT CCGCGAAAGC TTCTCGCACC CTGCGTGCCT CGTCGTCATG
GCGGGAATCG CGGCGGCCCT GACCGCGCAG GGGATTACAT TCGCGCTTTC GAATTACCTC
TATCTCTACG TGTGGAAGTT CACGCCGACC GCGCTCAAGG CCTTCCCCTT CCTGCTTTTC
GCCAGCGTCG TGGGCGCGTC GCTGCTGGTG GGCAAGGCGC AGGCGCGTTG GGGAAAGGCG
GGGACCGTGA TCCGCATGGC ACCGCTCGGC ATGGTCTTCT GGGCGGGACC CCTGATCCTG
CGCTGGCTGG GGCTGTGGGC TCCGGACGGA TCGACCGCGT CGATCGCGGG CATGTTCGCC
TGCACGCTCC TGTCGAACAC GTTTACCGTC ACGGGCACGA TGACCCTGTG GTCGATGGTC
GCGGACGTCG TCGAGGCTTC GGAGGAGCAG ACGGGACGCC GCTCCGAAGG AACGCTTTCG
GCCGGCGCAT TCCTCGCCTC GAAGTGCGCC GGGGGACTGG GCGTATTCCT GACCGGGCTC
CTGCTGAGCT TCGCGGGGCT CGAGGCGAAC ACGGCGCCTG CCGACGTGCT GCCCGAAGTC
ACCTATCGCC TGAGCCTTGC CTATGCGGCG AGCATCGCGC TCCTGGCCGT GCTGACGGCG
CTGGTCGTGC AACGCTTCCC GATCGACCGG GCCGCACACG AGGCGCGGCT GGCGAGGCTC
GACCAGGTGG CGAGGGTCGA TCCGGACGCC GCGGGCCTTC ATCCTTGA
 
Protein sequence
MIPIQGKVPT RLALFNGLGS VAYGIKDNGF ATFLLLFYNQ VLGMDARLVS LALLIALVFD 
GLIDPVVGHI SDRTRTHWGR RLPFLYLAPI PLGLAWIFLW SPIGEPSFAM LLMSAIMVRA
LVAMCEVPSA ALVAEISRDY DERTRLTRFR FLFSWGGGLL MLLLAYGVFL PNAMLAREGY
RNFGLFGAGL MVACVLLSAI GQHRAVAGMP PERATADKGA LASLGEIRES FSHPACLVVM
AGIAAALTAQ GITFALSNYL YLYVWKFTPT ALKAFPFLLF ASVVGASLLV GKAQARWGKA
GTVIRMAPLG MVFWAGPLIL RWLGLWAPDG STASIAGMFA CTLLSNTFTV TGTMTLWSMV
ADVVEASEEQ TGRRSEGTLS AGAFLASKCA GGLGVFLTGL LLSFAGLEAN TAPADVLPEV
TYRLSLAYAA SIALLAVLTA LVVQRFPIDR AAHEARLARL DQVARVDPDA AGLHP