Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0905 |
Symbol | |
ID | 3917991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 960251 |
End bp | 960754 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640443639 |
Product | phenylacetic acid degradation-related protein |
Protein accession | YP_496184 |
Protein GI | 87198927 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.503626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGCA ACCCGGAAAG CACCGGAGGC CGCCCGGCCA TCCCGCCCGG CATGGATTTC GATCCGTCGC GCTTCGGCTC GTTCATGATG CGCCACGGGC ACACCGGCTT CATCGGCATG CAGTATCGCG ACCACGGCGA TAACTGGATC GAACTCGCCC TTCCCTGGCG CGAAGACCTC GTCGGCGATC CGGAAACGGG CGTCCTCGCC TCAGGCCCGA TCATCAGCCT GCTCGACAAT GCCACCTCGA TGTCGGTCTG GGCCCTGCGC GGCGGATTCC GCCCCCAGGT CACGCTCGAC CTTCGCGTCG ATTATGTGCG CGCGGCAACG CCGGGCAAGA CCATCGTCGC CTGGGCAGAA TGCTACCAGC TCAAGCGCTC GATGGCGTTC GTGCGCGGCA TCGCCCACGA TGGCGACATT TCCGATCCGG TTGCCCACGC CGCCGGCATC TTCATCCAGG TCGACGCCGA CGGCTGGTCC CGCGATTCCG GAGCCAAGGC ATGA
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Protein sequence | MDSNPESTGG RPAIPPGMDF DPSRFGSFMM RHGHTGFIGM QYRDHGDNWI ELALPWREDL VGDPETGVLA SGPIISLLDN ATSMSVWALR GGFRPQVTLD LRVDYVRAAT PGKTIVAWAE CYQLKRSMAF VRGIAHDGDI SDPVAHAAGI FIQVDADGWS RDSGAKA
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