Gene Saro_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0905 
Symbol 
ID3917991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp960251 
End bp960754 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content66% 
IMG OID640443639 
Productphenylacetic acid degradation-related protein 
Protein accessionYP_496184 
Protein GI87198927 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.503626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGCA ACCCGGAAAG CACCGGAGGC CGCCCGGCCA TCCCGCCCGG CATGGATTTC 
GATCCGTCGC GCTTCGGCTC GTTCATGATG CGCCACGGGC ACACCGGCTT CATCGGCATG
CAGTATCGCG ACCACGGCGA TAACTGGATC GAACTCGCCC TTCCCTGGCG CGAAGACCTC
GTCGGCGATC CGGAAACGGG CGTCCTCGCC TCAGGCCCGA TCATCAGCCT GCTCGACAAT
GCCACCTCGA TGTCGGTCTG GGCCCTGCGC GGCGGATTCC GCCCCCAGGT CACGCTCGAC
CTTCGCGTCG ATTATGTGCG CGCGGCAACG CCGGGCAAGA CCATCGTCGC CTGGGCAGAA
TGCTACCAGC TCAAGCGCTC GATGGCGTTC GTGCGCGGCA TCGCCCACGA TGGCGACATT
TCCGATCCGG TTGCCCACGC CGCCGGCATC TTCATCCAGG TCGACGCCGA CGGCTGGTCC
CGCGATTCCG GAGCCAAGGC ATGA
 
Protein sequence
MDSNPESTGG RPAIPPGMDF DPSRFGSFMM RHGHTGFIGM QYRDHGDNWI ELALPWREDL 
VGDPETGVLA SGPIISLLDN ATSMSVWALR GGFRPQVTLD LRVDYVRAAT PGKTIVAWAE
CYQLKRSMAF VRGIAHDGDI SDPVAHAAGI FIQVDADGWS RDSGAKA