Gene Saro_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0871 
Symbol 
ID3917956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp926038 
End bp926886 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content68% 
IMG OID640443604 
Producthypothetical protein 
Protein accessionYP_496150 
Protein GI87198893 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATGC ATGACGCAGG GGACGGCGGA ATGAGCCAGT CCGCAACGGT CCAGGCCATC 
GGACGGCTTG CCGCCGACAT GCAGAGCGAT GGGCAGGGCG ATGGGCAGAG CGACGGGCAA
CGCTTCGTCC TGCGCGGGGT CGATGGCTGG TTGCAGGGCC GCACGATGTA CGGCGGCGCA
TCATCGTTTC TCGCATATGC GGCGGCGCGC AAGGCACGGC CGGACCTGCC CCCGCTGCGC
GGCGCGCAGG TCGGTTTCAT CGCGCCGGTC GGACAGGACA TGGACATTGC CGTCAGCGTG
CTGCGCGAAG GCAAGAGCGT AAGCCAGATC CAGACCAATC TCTATTGCGA CGGCGCGCTT
GCGCATCGCG GACTCTGGCT GTTCGGCAGC GCCCGCCAAT CGAACGGGGG CGTTGCGCCG
GGAACGGCCG AGGGCTTCCT GCCGGTCGAG GAGATGGAAC CCATCGGATC GCCCGAGGGC
CTGCATTTCG TTCGCAATCT CGAGATCCGC AGGGCCGAGC CAAGGGGCGG CCTCAGGCAG
GGCACGGTCC GCCGCTGGGT ACGGCTGAAG GACCGCGACG GGCTGGACCC GATCGGCGAA
CTGGTGTTGC TGGGGGATGC GCTTCCCCCC GGATCGATCC GCGCGATGGA GCGGCAGGGA
CCGATCAGCT CGATCAACTG GTCGCTGACC CTGCTGGGCG ACGCGCCGAC GACGCGGGAT
GGATGGTGGC TGCTCGAAAC CGCATCGAAC CACATGGCCG ACGGTTTCAG CAGCGAGACG
CTGCGGATGT GGAACGCCGA TGGCGTGGAA GTGATGCGCG GGCTCCAGAG CGTCGCGATC
TTTGGCTGA
 
Protein sequence
MQMHDAGDGG MSQSATVQAI GRLAADMQSD GQGDGQSDGQ RFVLRGVDGW LQGRTMYGGA 
SSFLAYAAAR KARPDLPPLR GAQVGFIAPV GQDMDIAVSV LREGKSVSQI QTNLYCDGAL
AHRGLWLFGS ARQSNGGVAP GTAEGFLPVE EMEPIGSPEG LHFVRNLEIR RAEPRGGLRQ
GTVRRWVRLK DRDGLDPIGE LVLLGDALPP GSIRAMERQG PISSINWSLT LLGDAPTTRD
GWWLLETASN HMADGFSSET LRMWNADGVE VMRGLQSVAI FG