Gene Saro_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0648 
Symbol 
ID3918073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp687663 
End bp688358 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content62% 
IMG OID640443379 
Productprohead peptidase 
Protein accessionYP_495929 
Protein GI87198672 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.857863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGTA AGAGCGGCGG GCTGAAGCTC CGCGATTTTC ACCTGAGCGT GAAGGCGCAG 
GATATCGGCG ACGATGGCAG CTTTACCGGG TACGGTTCCG TGTTCGGCGT TGTCGACAGC
TATCAGGAAG TCGTCGCGAA GGGCGCCTTC ACTGCGAGCC TCGCCGAACT TTCCTCGAAG
AACCGCAAGG TTCCGGTGCT GTGGCAACAC AGACAGTCGG AGCCGATCGG GGTGTACGAC
ATGCTCGAGG AGGACGATCT CGGGCTGAAG GTCGCAGGCA AGCTCCTTGT GAACGACGTC
AACCAGGCGA AGGAGTCGTT GGCGCTGATG AAGGCAGGCG CCGTGACCGG CCTGTCGATC
GGCTATTTCG TCCGCAAGTC GTCCTACGAC GAGAAGACCG GCATCCGCAC CCTTCTTGAA
CTGGATCTGG TCGAGGTCAG CCTCGTGACC TTCCCGGCCA ATGATGAGGC GCGGATCGAC
GCCGTCAAGA TGAAGCTTGC CCATGGCGAG CTGCCCACTC TTCCCGAATT CGAGCGGCTC
CTGCGCGAGG CAGGCTTCTC GAAAACGAAG GCCGCCGTCG TCGCCGCGCA CGGCCTTCCG
CACCTGCTCC GGAGTGAGTC CGGCAGCGCA ATGGCGAATG AGGGCCTGAA GTCCCTCTCT
GATGCCTTGG CAGGCCTCAA GCTGCCGACC TTTTAA
 
Protein sequence
MQRKSGGLKL RDFHLSVKAQ DIGDDGSFTG YGSVFGVVDS YQEVVAKGAF TASLAELSSK 
NRKVPVLWQH RQSEPIGVYD MLEEDDLGLK VAGKLLVNDV NQAKESLALM KAGAVTGLSI
GYFVRKSSYD EKTGIRTLLE LDLVEVSLVT FPANDEARID AVKMKLAHGE LPTLPEFERL
LREAGFSKTK AAVVAAHGLP HLLRSESGSA MANEGLKSLS DALAGLKLPT F