Gene Saro_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0611 
Symbol 
ID3915623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp657484 
End bp658299 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content67% 
IMG OID640443341 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_495892 
Protein GI87198635 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0926261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTGGG TAAACAGGCA CGTCCGGCGG AACGACGGCC TCCTTCTCGG AGCCCTGCCG 
ATCCTCGCGC TGGTGCTGAT CTACCTGTTC GTCGCGGCGC AGCGCCATGC GGCGAACCCG
ATGGACAAGA TCCTTCCCCT GCCCGCCGGC ATGGCCAGTG CGATGTCCTC GCTGCTGTTC
GAAGTGGACC CGCTGTCCGG GCAGTACCTG TTCTGGGCCG ACACGCTCGC CAGCCTCCAG
CGCCTCGGTC TCGGCCTCGG CATCGCGACG GCAATGGCCC TTCTGGTCGG GTTGGTCCTC
GGAGTGCTGC CGCCGCTTCG CGCCACCATC GGCCCCCTCG TCACGGGCAT TGCCGTGATC
CCGCCGATCG CGCTGCTTCC CATCCTGTTC ATCGCCCTGG GGCTGGGCGA GACGGCAAAG
GTTGCGCTCA TCGTCATCGG CATCGCCCCG GTCATGGTAC GCGATATCGC CTCGCACGTG
GGCGACCTCC CTCGCGAACA GATCGTCAAG GCGCTGACGC TGGGCGCAAG CTCCTGGCAG
ATCATGATCC GTGTCGCCCT TCCCCAGGCC ATGCCTCGCC TGATCCACGC AGTGCGCCTT
GCCCTGGGGC CGGCATGGGT ATTCCTGATC TCCGCCGAAG CCATCGCCTC GGACGTCGGC
TTGGGCTACC GGATCTTCCT GGTCCGCCGC TACCTGTCGA TGGACGTGAT CATCCCCTAT
GTCGCCTGGA TCGCGCTTCT GGCCATAGTC ATGGACGTGG CGCTCGCCAG GCTGAGCCGA
CGAGCGTTCC CCTGGGCCCA TGGAGCAGGC CGGTGA
 
Protein sequence
MRWVNRHVRR NDGLLLGALP ILALVLIYLF VAAQRHAANP MDKILPLPAG MASAMSSLLF 
EVDPLSGQYL FWADTLASLQ RLGLGLGIAT AMALLVGLVL GVLPPLRATI GPLVTGIAVI
PPIALLPILF IALGLGETAK VALIVIGIAP VMVRDIASHV GDLPREQIVK ALTLGASSWQ
IMIRVALPQA MPRLIHAVRL ALGPAWVFLI SAEAIASDVG LGYRIFLVRR YLSMDVIIPY
VAWIALLAIV MDVALARLSR RAFPWAHGAG R