Gene Saro_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0560 
Symbol 
ID3918042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp609600 
End bp610397 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content69% 
IMG OID640443290 
Producthypothetical protein 
Protein accessionYP_495841 
Protein GI87198584 
COG category[S] Function unknown 
COG ID[COG3752] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAG CGCTTCTGGT GAACCTGGTG GTTCTCGTGC TGGGCATGCT GGCGCTGTGG 
CGCGTGGCGG TGCGCATCGA CGATGTCAGC TTCATCGACG CCGTCTGGGG CGGCGGCATG
GGGGTGCTTG CGCTGGTGTC CTGGCTTCAC GTTCCGGGCG GACCGGGAGT GCGGGCGCAC
CTCATCGCCG CCATGGCCGC GATCTGGGCG GCCCGGCTGG CCTGGCATCT CTACACCCGC
TGGCGCGCCA ATGGAGAGGA CCCACGCTAT GCGCGCATCC TCGGCAAGGC GCGGGCGCGC
GGACAATACG GTTCGGCAGC GCTCAAGGTC GTGTTCGCAC CGCAGGCCGT GCTGTTGTTC
CTGACCTGCC TGCCCGCGCA ACTGGGCGTT CTGGCAAGCA CGGCCCCCGC ACCACTCGGC
CCGCTTGCCG TGGCGGGTGC GGCGGTATGG CTCGTCGGCA TCCTGTTCGA AGCTGTCGGC
GATGAGCAGC TCAAGCGCTT CCTTGCCGAT CCCGCCAGCA AGGGCAAAGT GCTGGACACC
GGCCTTTGGC GCTTCACCCG CCACCCCAAC TATTTCGGCG ATGCCTGCGT GTGGTGGGGC
ATCTGGCTTG CCGCAGCGGA CGCGGGCCTG TGGGTGGCGC TGGCGAGCCT TGTCGGCCCG
GTGTTCCTCA CGTTCACCCT CACCCGCTGG TCGGGCAAAC CCCTGCTGGA AAGGGGCATG
GCGGAACGGC GGCCAGGCTA TGCCGAGTAT GTCCGCCGGA CGTCGGGGTT CGTGCCCTGG
TGGCCGAAAA GCGGTTAG
 
Protein sequence
MAEALLVNLV VLVLGMLALW RVAVRIDDVS FIDAVWGGGM GVLALVSWLH VPGGPGVRAH 
LIAAMAAIWA ARLAWHLYTR WRANGEDPRY ARILGKARAR GQYGSAALKV VFAPQAVLLF
LTCLPAQLGV LASTAPAPLG PLAVAGAAVW LVGILFEAVG DEQLKRFLAD PASKGKVLDT
GLWRFTRHPN YFGDACVWWG IWLAAADAGL WVALASLVGP VFLTFTLTRW SGKPLLERGM
AERRPGYAEY VRRTSGFVPW WPKSG