Gene Saro_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0440 
Symbol 
ID3918307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp480001 
End bp480681 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content64% 
IMG OID640443169 
Productcalcium-binding EF-hand protein 
Protein accessionYP_495722 
Protein GI87198465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0765893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT TCCAGCTTGC TGCTGCAGCC GCCGTCATGG CGACCGCCTC GGTCGCACTC 
TATGCGGCAT CGCCCGCGAT TGCGCAGAAG ATGGACGCCG ATGGCGACAA GACCATCACC 
TGGGCGGAAG CCAAGGCGAA GTCCGACGAA ATGTGGACGA AGCTCGACGT CAACAAGGAC 
GGCAAGCTCG ACCAGGCCGA CCGCGCCGCC AAGTGGGCCG AAAAGTTCGC CGAGATCGAT 
ACCGACAAGA ACGGTTCGAT CAGCCGCGAC GAATTCATCG CTCATCACGA AGCCATGAAG 
GACCGAATGG GCGATATGCC GGGCGATCGT CCCGATGCCT CGCCTGGCGA ACGTCCTGGC 
GGCCATCCTG ACGGCATGCC CGGCCACGAA GGCCATCGTG GCAAGCGCGG TCCCGGCGGG 
CACCACGGCA TGATGGGCGG TGGCATGCAC ATGCTCGGCA TGGCCGATGC CAACAAGGAC 
GGCACCGTGA CCCGCGCCGA ATTCGATGCC GCCGCCAAGG CACACTTCGA CAAGGCCGAC 
GCCAACAAGG ATGGCAAGAT CACGCCGGAA GAACGTCGCG CCGCGATGAA GGAAATGATG 
GGCAAGATGG GCCGCCCCGG CGAACGTGGC CCGATGGGCG CAATGGGCGA TGGACCTCCG 
CCCCCGCCTC CGGCTAACTG A
 
Protein sequence
MKKFQLAAAA AVMATASVAL YAASPAIAQK MDADGDKTIT WAEAKAKSDE MWTKLDVNKD 
GKLDQADRAA KWAEKFAEID TDKNGSISRD EFIAHHEAMK DRMGDMPGDR PDASPGERPG 
GHPDGMPGHE GHRGKRGPGG HHGMMGGGMH MLGMADANKD GTVTRAEFDA AAKAHFDKAD 
ANKDGKITPE ERRAAMKEMM GKMGRPGERG PMGAMGDGPP PPPPAN