| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0427 |
|---|
| Symbol | |
|---|
| ID | 3917573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 466174 |
|---|
| End bp | 467673 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640443156 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_495709 |
|---|
| Protein GI | 87198452 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.198884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCTC CCGCAGCCAA AATGCGAGTG AACGGGGAAG TGCGAAAAGT GAAGCGTGCG
AATCTCGGGG CCGGCCTTTC CGGCATGCTT GGCGTGGCTG TCGTGGCGCT GACCTTTGCT
TCCCAACCAC TCGCGGCGAA GGCCGGAACT CAGGCGGGAT CTCAGGCCGG CACTCAGGCC
GGCACTCAGG CCGGCACTCA GGCCGGTCCG GTTGACCTGA CCAAGCAGGC CAAGCCTGCG
CCGGTCGTTG CTCCGACGGC AACGCCGACT GCGGCCCCCG CTGCATCACC CACAGTATCG
CCCACTGCCG CGCCGGTCGA AGCGCCGACG CCTGTGCCTG CGCCGCACTG GACGCAGAGC
GATGCGCAAG GCCTGCTCGC CATGATCAAG GGCATCGGCG CCGAAGGGCT GTTCCCCAGG
GACTACCAGC CCGAGGCATT GTCGGCCGCG ATCCTGAAGG GCGAAGGGCC CGAACTCGAC
GAGACGGCAA CGCGCCTGTT CACCTGGCTG GCCGAGGACC TGCGCGATGG CCGCACACCG
ATGACGGCGC GCGTGCAGTG GTTCGCGGTC GACCCCGACC AGGACGTCCA CCCGACCTCG
CTGATCCTTG CTGATGCCCT TGCAAGGCAC GACGTGAAGG GCGCGCTCAT GGCACTGCTG
CCAACGGTGC CGGACTATGC CGCGCTCAAG GCCGCGCTGC CCAAGGCGCA GACCCAGAAG
CAGGCCGCGC TGATCCGCGC CAACATGGAT CGCTGGCGCT GGCTGGCGCG CGACCTGGGC
ACGCAGTACC TGCTGGCCAA CGTCCCCGAG CAGGTGCTCC GCCTGACGGT GCGCAACAAG
ATCATCAGCA CCTACAAGGT CATCGTTGGC AAGCCCGGCA AGACTGCGAC CCCGCAGCTG
GCCGAGACGG TGGAAGGCGT GATCTTCAAT CCCACATGGA CCGTGCCGCA GTCGATCGTC
GTCGGCGAAG GGCTGGGCGC ACGTCTGGTC AACAACCCGC GTCAGGCCGA GCGCGAGGGC
TACAAGGTGA CCAAGGCGGG GGATGGCACG ATCTATGTCG TCCAGCAGCC GGGCGACAAC
AACTCGCTGG GCCGGATGAA GCTCGACATG CCCAACGAGC ACGCGATCTT CCTGCACGAT
ACGCCCAACC GCAACCTGTT CAACCTGCCC GCCCGCGCGC TCAGCCACGG TTGCGTGCGC
GTGGAGCGGG CGACCGAGCT GGCCATGACA ATGGCGATCC TCGGGGCCGG GATGACTCCC
GACGATGCCG TCGCCGCGCA TACCTCGAAG GTCTATACCA AGGTGCCGAT GACCAAGACA
TTCCCGGTCT ATCTCACCTA CTTCACCGTC GCGCGCGACG TGAACGGAAT GCTGCGGTCC
TTCCCGGACA TCTACAACCG CGACGCGCCG GTGCTCGCCA CCTTCGCCCA GCCCCGCCAG
CTCCACACGA CCCAGCGCAA GAGCAACGAG GAAGTCATCA AGCTCGACAA TCCGCTCTAG
|
|---|
| Protein sequence | MTAPAAKMRV NGEVRKVKRA NLGAGLSGML GVAVVALTFA SQPLAAKAGT QAGSQAGTQA
GTQAGTQAGP VDLTKQAKPA PVVAPTATPT AAPAASPTVS PTAAPVEAPT PVPAPHWTQS
DAQGLLAMIK GIGAEGLFPR DYQPEALSAA ILKGEGPELD ETATRLFTWL AEDLRDGRTP
MTARVQWFAV DPDQDVHPTS LILADALARH DVKGALMALL PTVPDYAALK AALPKAQTQK
QAALIRANMD RWRWLARDLG TQYLLANVPE QVLRLTVRNK IISTYKVIVG KPGKTATPQL
AETVEGVIFN PTWTVPQSIV VGEGLGARLV NNPRQAEREG YKVTKAGDGT IYVVQQPGDN
NSLGRMKLDM PNEHAIFLHD TPNRNLFNLP ARALSHGCVR VERATELAMT MAILGAGMTP
DDAVAAHTSK VYTKVPMTKT FPVYLTYFTV ARDVNGMLRS FPDIYNRDAP VLATFAQPRQ
LHTTQRKSNE EVIKLDNPL
|
|---|
| |