Gene Saro_0422 details

Gene Information

• Locus tag: Saro_0422
• Symbol: ruvA
• ID: 3917568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 459269
• End bp: 459883
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640443151
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_495704
• Protein GI: 87198447
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.199605
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGCCA AGCTCACCGG CATTCTTGAC GACACCGGGC CCGATTGGGC CGTGATCGAC 
GTGAACGGCG TCGGCTACCT CGTCCATTGC TCGGCCAAGA CGCTCACCCA TCTCGGCCTC 
CGGGGTGACA AGGTCGTCGT CCACACCGAA ATGCAGGTGA GCGAGACCGA CCAGCGCCTG 
ATCGGCTTTA CCAGCGCGGG CGAACGCGCG TGGTTCCGGC TGCTGACGGC GGTGCAGGGC 
GTCGGCAGCA AGGTCGCTCT TGCAATCCTT TCGGCACTGT CGGTCGAGGA ACTCCAGCGC 
GCCTGTGCCC ACGGCGACAG CGCGATGGTG GCGCGCGCCA ATGGCGTCGG CCCCAAGCTC 
GCCAGCCGCA TCGTCAACGA ACTGAAGGAC AAGGCCGGCG GTCTTGCGGG CTATGCCTCG 
CCGGTCGGCC CGGGCGGCGA GGCCTTCGTC GCGCCCCCTG GAAATGCCAG CGCGGATGCG 
GTCTCGGCCT TGCAGAACCT CGGTTTCAAA CCCGCCGTCG CCAGCAGCGC CGTCGCCGCA 
GCAGTCAAGG AACTGGGCGA GGATGCGGGG TTGAACGACC TGGTGCGCGT GGCGCTGAAG 
CGGGCGGCGG GATAA 

 

Protein sequence

MIAKLTGILD DTGPDWAVID VNGVGYLVHC SAKTLTHLGL RGDKVVVHTE MQVSETDQRL 
IGFTSAGERA WFRLLTAVQG VGSKVALAIL SALSVEELQR ACAHGDSAMV ARANGVGPKL 
ASRIVNELKD KAGGLAGYAS PVGPGGEAFV APPGNASADA VSALQNLGFK PAVASSAVAA 
AVKELGEDAG LNDLVRVALK RAAG