Gene Saro_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0405 
Symbol 
ID3917551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp443690 
End bp445009 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content61% 
IMG OID640443134 
Productdi- and tricarboxylate transporters-like 
Protein accessionYP_495687 
Protein GI87198430 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTCG AACAGATCAT AACCCTTGTT GTCCTGGCTG GCGTCATCGC CGCCCTGATC 
CATGACAAGA TCCGCGCTGA CATCGTCGCG CTTGCCGGTG CGGCAGTGCT GCTGGCCAGT
GGGGCAGTCC GGCCAAGCGA GGTCCAAAGC GCCTTCGGCA GCCCCGCGCT CATCACGCTG
GCTTCCCTGT TTGTCATTGC CCATGCCATG GAGCTTTCGG GCCTGCTCGA TCGCCTGATC
AGGGCCATGG TCAAAGCTTG CCGAAAAACT GGAGCGACCG GTATCTGGGC CATGATCGGG
CTATGTGGGG CCGGTTCGGC ATTCCTCAAC AACACACCGA TCGTGGTCAT GGCGGCTCCC
GTTGTCAGGG ATGTCGCCAA TTCCCTGAAG CTCGATGCCA GGCGGTTCCT GATGCCACTG
TCCTATGTGG CGGTGCTGGG CGGCTGCTGC ACACTTATCG GCACTTCAAC CAACCTGCTT
GTGGACGACA TGGCCCGCAC TTCGGGGCAG GCGCCCTTCA CGATCTTCGA GATTACGCCC
GTCGGGCTGG CCGTTGCCCT GGCTGGCGGG CTCTATCTGA TGCTGTTTTC CGGGCCTTTG
CTCAAGTCAT CGCCGCGGAT CGACGGACCT GATCCCGCAG AAATAGCCAA GCATCATGTC
AGCCATGTTG ATATTGCCGG GGATGCCGTT GGCGACCCTC GCGATTTTGC CGAGGATCAT
CGCTTTGATC TTACCAAGGC ACTGGCATCA GTCGGCGTTT TTATCGGGGT CGTGGCGCTG
GCTGCCTTCA ACCTCATCCC CATCGCGGCT GCGGCCTTCG CCGGCGCGGT CCTGCTTATC
CTCGTCCGGG TCATCCGGCC TGAGGAAGCC TATGGCGGCT TGCGGCCGGA AATCCTGCTG
CTGATCGCGG GCATGGTGGT GATCGGCATT GCGCTGGAGG AAACCGGCCT CGCTTCGTCA
GCGACCGACT GGCTGGTCAA GTCGGTCGAC GGCTTCGGCC CGTTGATGGC GCTGGTACTA
CTCTATGGCG GCACTTTGCT GCTTACCGAA CTGCTGTCCA ACGCAACCGT CGCTGTCCTC
GTAACACCGC TGGCCGTGGC TCTTGCCGAA AGCATGGGAG TGAGCCCGCG TCCGTTCCTC
GTCGCGGTCA TGATCGCGGG GAGCGCGGCG TTTGCCACGC CCTTCGGCTA CCAGACCAAC
GTACTCGTCT ATCAGATGGC GGGTTATCGC TACATGGATT TCGTCAAGGT CGGGCTACCG
TTGAACCTGG TGACCTGGGT CGTCGCTGTT GCGGCGATTC ACTGGTTTTT CCCATTCTGA
 
Protein sequence
MSFEQIITLV VLAGVIAALI HDKIRADIVA LAGAAVLLAS GAVRPSEVQS AFGSPALITL 
ASLFVIAHAM ELSGLLDRLI RAMVKACRKT GATGIWAMIG LCGAGSAFLN NTPIVVMAAP
VVRDVANSLK LDARRFLMPL SYVAVLGGCC TLIGTSTNLL VDDMARTSGQ APFTIFEITP
VGLAVALAGG LYLMLFSGPL LKSSPRIDGP DPAEIAKHHV SHVDIAGDAV GDPRDFAEDH
RFDLTKALAS VGVFIGVVAL AAFNLIPIAA AAFAGAVLLI LVRVIRPEEA YGGLRPEILL
LIAGMVVIGI ALEETGLASS ATDWLVKSVD GFGPLMALVL LYGGTLLLTE LLSNATVAVL
VTPLAVALAE SMGVSPRPFL VAVMIAGSAA FATPFGYQTN VLVYQMAGYR YMDFVKVGLP
LNLVTWVVAV AAIHWFFPF