| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0311 |
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| Symbol | |
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| ID | 3916248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 336357 |
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| End bp | 337040 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640443040 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_495593 |
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| Protein GI | 87198336 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCGAC GCCCCACCAT TCGTTATGGC AGGACTCCCG AACCCGAAAC GCCCTACCAG
CGCGCCGCCC AGGTCTGGGA TGACCGGATC GGCTCGGCCC GCGTTCAGGC CCGCAGCTGG
CGACTCGCCT TCTTCGGCGC GCTTGGCCTG TCGACCTGCC TGACCGCCGG GATCATCTGG
CAGGGCGCAC GCGGCAGCAT TGTCCCCTGG GTAGTCGAGG TCGACAAATT GGGCGAAGCC
CAGGCCCTGG CCCCTGCGGA TGCCGGTTTT GCACCGTCCG ATCCCCAGAT CGCCTTCCAC
CTCGCGCGCT TCATCGAGCA GGTTCGCAGC ATCCCCGACG ATCCGATCGT CGTGCGCCAG
AACTGGCTCA GGGCCTATGA TTTCGCGACC GACAAGGGCG CGCTCGCCCT CAACGACTAT
GCCCGGACCA ACGACCCCTT TGCGCTCATC GGGCGCGAAC AGGTCGGCGT CGATGTCACC
AGCGTGATCC GGGCATCGCC GACCAGCTTC CGCGTCGCCT GGGTCGAGCG CCGCTACCGC
GACGGCAGTC TCGCCGAGAC AAGCCGCTGG ACCGCGATCC TGACCACCGT CGTCCAGCCT
CCGCGCACGC CTGATGCCCT GCGCAAGAAC CCGCTCGGCA TTTTCGTCAA TGCCATCAAC
TGGTCGAAGG AACTCGGATC ATGA
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| Protein sequence | MFRRPTIRYG RTPEPETPYQ RAAQVWDDRI GSARVQARSW RLAFFGALGL STCLTAGIIW
QGARGSIVPW VVEVDKLGEA QALAPADAGF APSDPQIAFH LARFIEQVRS IPDDPIVVRQ
NWLRAYDFAT DKGALALNDY ARTNDPFALI GREQVGVDVT SVIRASPTSF RVAWVERRYR
DGSLAETSRW TAILTTVVQP PRTPDALRKN PLGIFVNAIN WSKELGS
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