Gene Saro_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0236 
Symbol 
ID3917585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp243963 
End bp244673 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID640442961 
ProductC-5 sterol desaturase 
Protein accessionYP_495518 
Protein GI87198261 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.652571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGCG TGCTGGTCTC GGCCTGGGCC ATGACGGTGA TCGTCGCCGT CCGCTATCTT 
GCGACCAGCG GTCTTTTCGC CTGGCTGACG GCCAGGGTGA GGCCCGGCCA CTATGCCGGG 
CTCGACCGGC AGATCCGCTC GGAGATCGGG TGGAGCCTTG CCACCGCGGC GATCTATGGC 
GTGCCGGCGG GCGTGGTCGC CTGGGGCTGG CAGGAGCGGG GGTGGACGCG GATCTACACC 
GATCCGCATG CCTTGCCGCT CTGGTGGATG CCGGTCTCGC TCCTGCTCTA CCTCTTCATC 
CACGATACCT GGTTCTACTG GACCCACCGC TGGATGCACC GGCCGGCCGT GTTCCGCCGC 
ATCCATGCCA TCCACCACGC CAGTCGCCCG CCGACGGCGT GGGCCGCAAT GAACTTCCAC 
CCGGTCGAGG CCGCCGTGGT CTCGCTGCTG ATCCCCGCGC TGGTCTTCGC GATCCCGATC 
CACGTCGCGG TTCTGGGGCT GGTGCTGCTG GTGATGACGG TGATGGGCGT GACCAACCAC 
ATGGGCTGGG AAATGTTTCC ACGCGCGCTC GTTCATTCCC GGGCAGGGAA CTGGCTGATA 
ACCGCAAGCC ACCACCACCG CCATCACGAG CAATACCGCT GCAACTATGG CCTCTACTTC 
CGGTTCTGGG ACCGGTTGTG CGGCACCGAC AAGGGATTGT CCGCCCCATG A
 
Protein sequence
MNGVLVSAWA MTVIVAVRYL ATSGLFAWLT ARVRPGHYAG LDRQIRSEIG WSLATAAIYG 
VPAGVVAWGW QERGWTRIYT DPHALPLWWM PVSLLLYLFI HDTWFYWTHR WMHRPAVFRR 
IHAIHHASRP PTAWAAMNFH PVEAAVVSLL IPALVFAIPI HVAVLGLVLL VMTVMGVTNH 
MGWEMFPRAL VHSRAGNWLI TASHHHRHHE QYRCNYGLYF RFWDRLCGTD KGLSAP