| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0186 |
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| Symbol | |
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| ID | 3916174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 189604 |
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| End bp | 191061 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640442912 |
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| Product | Type I secretion outer membrane protein, TolC |
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| Protein accession | YP_495469 |
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| Protein GI | 87198212 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCG GCAAGGCACT GCGCCTCCTC CTGACGGCCA GTGCCGCCGC GCTCATCGCC
ACGCCTGCCC TGGCCGATGA CCTGCGCGAG GCGCTGACCA GCGCATACAA CACCAATCCC
ACGCTCCAGG CCGCGCGCGC AAACCAGCGC GCGACGGACG AAGGGGTGCC GCTGGCGCGG
TCCAGCGCCC TGCCCAGCCT GTCGGGAACG GCGACCTACA CCGAATTCCT CAAGAAGACG
CCCAACGCCT TCACCGCACC CGACCGCTCG CTTTCCGCAG ACCTGTCGCT TGGCGTTCCG
GTCTATGCGG GCGGCGCCGT CAAGAACTCG ATCCGCGCGG CCAAGACCCG CGTCGAGGCC
GGACAGGAAG ACCTGCGCGC AACTGAGTCC GGCATCTTCA GCCAGGTCGT GGCCGCCTAC
ATGGACGTGA TCCGCGACAG CGCGATCGTC GGCCTCAATC GCAACAACGT CGAAGTGCTC
GAGGTCAACC TCAAGGCGAC GAGCGACCGC TTCGACATCG GTGACGTGAC TCGCACCGAC
GTGGCGCAGT CGAACTCGCG CCTCGCCCTT GCGCGCGGCG ACCTGCGCAC CGCCCAGGCC
AATCTTGTGT CCAGCCGCGA GCGCTATATC CAGGTCGTCG GGAAAGCCCC GGCAGACCTC
CAGCCGCCGC CGCCGCTTCC GGGCCTGCCC GCAACGCCGG ACGACGCGGT CGACTTCGCG
CTGGAGAACA ACCCCGACCT GCTGGCCGCG CGCGAGCGTA GCAAGGCCGC CGGTTTCGAC
GTGAAGGTGG CCGACGCCGC CAAGCTGCCG ACAATCTCGC TCTTCGGCGG CAGCAACTAC
ACCGATTACT TCAATACGCT CGGCGGCAAC TCCTCCGCCG CCTTTGCGCA GCACCAGACG
ACGGCGCAGG CCGGCGTGCG CGCCTCGATA CCGCTTTACC AGGGCGGCGC TCCTGCTGCG
CAGACGCGGC AGGCACAGGC GCGCGAAAGC GCCACGCTGG AGCAGGAAAT CGGCGTGGAA
CGCGAAGTGA TCGCGACCGT GCGATCGGCC TATGCGTCAT GGAAGGCCGC GAACGAGATC
ATCGCGATGA ACCAGACCGC GGTCGATGCC GCCGCGCTCA GCCTCGAAGG CGTGCGCGCG
GAGAATACCG TGGGCAATCG CACGATTCTC AACATCCTCG ATGCAGAGCA GGAACTGCTG
CGCGCGCAGG TCCAGCTCGT CGCCGCCCGC CGCAATGCCT ATGTCGCGGG CTTCAACCTG
CTTGCCGCGA TGGGCAAGGC GGATGCCAAC GACCTCGGCC TCGATGGCGG CGCACTCTAC
GATCCGCAGG TCAACTACGA CCGGGTGAAG AACCGCATCT GGGACTGGGA CCGCGATCCC
ACGCCCGTCG CGAAGTCGAC CCGCACCGTT GACACGCCCG CGCAGGATGC GACAATCGCG
CCCACGCCGA CGCCCTGA
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| Protein sequence | MTTGKALRLL LTASAAALIA TPALADDLRE ALTSAYNTNP TLQAARANQR ATDEGVPLAR
SSALPSLSGT ATYTEFLKKT PNAFTAPDRS LSADLSLGVP VYAGGAVKNS IRAAKTRVEA
GQEDLRATES GIFSQVVAAY MDVIRDSAIV GLNRNNVEVL EVNLKATSDR FDIGDVTRTD
VAQSNSRLAL ARGDLRTAQA NLVSSRERYI QVVGKAPADL QPPPPLPGLP ATPDDAVDFA
LENNPDLLAA RERSKAAGFD VKVADAAKLP TISLFGGSNY TDYFNTLGGN SSAAFAQHQT
TAQAGVRASI PLYQGGAPAA QTRQAQARES ATLEQEIGVE REVIATVRSA YASWKAANEI
IAMNQTAVDA AALSLEGVRA ENTVGNRTIL NILDAEQELL RAQVQLVAAR RNAYVAGFNL
LAAMGKADAN DLGLDGGALY DPQVNYDRVK NRIWDWDRDP TPVAKSTRTV DTPAQDATIA
PTPTP
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