Gene Saro_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0179 
Symbol 
ID3916167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp183684 
End bp184328 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID640442905 
ProductGntR family transcriptional regulator 
Protein accessionYP_495462 
Protein GI87198205 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCAAGG CCTCGCAGGA AGCCTATCGC AAGATTCGCG CCGGCATCCT GTCGGGGCAT 
TTCCCCGCCG GGCAGTTCGT GCCCGAGGAC GAATTCGCGC AATTCTGCGG CCTTTCGCGC 
ACCCCCGTTC GCGAAGCCAT CGCGGAACTG GTTTCGGAAA TGCTGCTCCA GCGCTCGGAC 
ACCAACCGCG TCTTCGTGCC GGTCTGGTCG GACGACGACG AGGAGGAGCT GTTCGCGCTG 
CGGGCCATGC TCGAAAGCCA CTGCGCGACC CGTGCGGCGC GTTTCATCAC CGATGAGCAG 
ATCGACGAAC TTCGCGCGCA TTGCGATTTC ATCGACCGCG CGATCTCGCA GTCGGACGGA 
CCGGACGTGT CCGGCTTTGT CGAGGGCAAC CGCCGGTTCC ACGCAGTGAT TCTCGCCGCG 
GCGCAGTCCG AACGGCTGGG GCAACTGTTG CGGTTCGTGG TCAGCCAGAT CGTCGTCCAC 
CGCACGGCGG AGCAATATAC CCGCGCCGAC ATGGAGCAGA GCCAGCGCGA CCATCGCGAC 
CTCGTCAGCG CATTCGCCAT GCGCGACGAG ATCTGGGCCG GAGCGATCGC CAACACGCAC 
ATCAGGCGCG CGGCGAACGC CTACCGGACC ATGCGTCAGG GCTGA
 
Protein sequence
MSKASQEAYR KIRAGILSGH FPAGQFVPED EFAQFCGLSR TPVREAIAEL VSEMLLQRSD 
TNRVFVPVWS DDDEEELFAL RAMLESHCAT RAARFITDEQ IDELRAHCDF IDRAISQSDG 
PDVSGFVEGN RRFHAVILAA AQSERLGQLL RFVVSQIVVH RTAEQYTRAD MEQSQRDHRD 
LVSAFAMRDE IWAGAIANTH IRRAANAYRT MRQG