Gene Saro_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0173 
Symbol 
ID3916161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp174140 
End bp174769 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content65% 
IMG OID640442899 
Productisochorismatase hydrolase 
Protein accessionYP_495456 
Protein GI87198199 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGC ACGAGGACGA TCTGGCCGCG AACTATGCCG GCGCCTTCGA CGGGCGCCTG 
CCGTTCGGCC AGTGTCCCGC GCTTGTCGTG GTCGATCTGG TCGAAGCATA TCTCCAGCCC 
GGATCGCCCC TCTACGCGGG AATCGAAGCG GCGCTTGAGA GCGCAGTCCG GCTGACGGAT 
GCAGCGCGCA ACGCAGGCAT TCCGGTGATC TTCACCAATG TCGAATACCA GCCGGGCGGC 
ACGGATGGCG GCGTGTTCTA CCGCAAGGTG CCTGCACTTC GGGTCTTCGA GAAGGGCTCG 
CCGCTCGGCG CGTTCCCGGC CGTGTTGTCG CCTCGCGAAG ACGAGATCGT CATCACCAAG 
CGCTATGCCT CGGCGTTTTT TGCAACGCAT CTGGCCTCAA CGCTCACGTC GCTTGGCGTG 
GATACAGTGC TGATATGCGG CACGTCGACG TCGGGTTGCA TCAGGGCAAC CGCGCTCGAC 
GCCTGCCAGC ACGGCTTCCT GCCTTTCGTC GTGCGCGATG CCTGCGGTGA CCGCCACCAG 
GCCCCGCACG AGGCCAACCT GTTCGATCTC CAGGCCAAGT ACGCCGAAGT GATCGGCGAG 
GCGGAGGCCC TGGCCTTCCT CAGACGCTAG
 
Protein sequence
MTQHEDDLAA NYAGAFDGRL PFGQCPALVV VDLVEAYLQP GSPLYAGIEA ALESAVRLTD 
AARNAGIPVI FTNVEYQPGG TDGGVFYRKV PALRVFEKGS PLGAFPAVLS PREDEIVITK 
RYASAFFATH LASTLTSLGV DTVLICGTST SGCIRATALD ACQHGFLPFV VRDACGDRHQ 
APHEANLFDL QAKYAEVIGE AEALAFLRR