Gene Saro_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0144 
Symbol 
ID3918118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp146028 
End bp146723 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID640442869 
Productglycoside hydrolase family protein 
Protein accessionYP_495427 
Protein GI87198170 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGA AACGGAACAC GGTGCGTAGG CGCCTGCTCG CGGCGTTGCT GCTGGTCGTG 
CTCGTGGGCG CGGGCGCCGG CTGGTGGACG TCGCGCACCT GGATGCCGGA CCGGACGCGC
TATCCGGTCC AGGGCGTCTG GCTGAGCGAC GATGATGGTA GCGTCGACTG GCGGTTTCTG
CGCGCCGCAG GCGCGGATTT CGCCTACCTG ACCGCCAGCG AAGGTGCCGG GACGCGGGAC
AGTGTCTATG CCGCAGGCGT CGAAGCAGCC CGGTTGCGCG GACTGCAGGT AGGGCCGGTC
CATGTCTACG ACCTGTGTGC CCCGGCCGAC GCGCAGGCCG CGAACTTCGT GACCGTGGTG
CCACGCGATC CGGAGTTGCT CCCACCGGCG ATTGCGCTCG ACATCGATTC GCGCACCTGC
CCTGAACCTC CCGGCGAGGC GCAGATGCAG AGCGAGTTGA CCACGTTCCT CAACCAGGTG
GAGAAGCATG CAGAGAAGCC AGCGATCCTG ATGGTGTCGC GCGGTCTGGA AAAGCAGTAT
CATCTTGCCG CCATGATCGA CCGCAATCTC TGGGTTTCGC AGGACTTCAT CGAGCCCGGC
TACGCCGGCA GGCCGTGGGT CATGTGGACA GCGACCAAGC GCCTGCGTCT GCATGGCGCA
AGCGGCCCCC TGCGCTGGGT CGTCGTGCAG CCATGA
 
Protein sequence
MAKKRNTVRR RLLAALLLVV LVGAGAGWWT SRTWMPDRTR YPVQGVWLSD DDGSVDWRFL 
RAAGADFAYL TASEGAGTRD SVYAAGVEAA RLRGLQVGPV HVYDLCAPAD AQAANFVTVV
PRDPELLPPA IALDIDSRTC PEPPGEAQMQ SELTTFLNQV EKHAEKPAIL MVSRGLEKQY
HLAAMIDRNL WVSQDFIEPG YAGRPWVMWT ATKRLRLHGA SGPLRWVVVQ P