Gene Saro_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0142 
Symbol 
ID3918116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp143844 
End bp145358 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content65% 
IMG OID640442867 
Productreplicative DNA helicase 
Protein accessionYP_495425 
Protein GI87198168 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCCA GCGAAGCCAT TCTCACCCGC GAACCTTCCG AGATTCGCGC ACTTCCCTCC 
AACGTGGAAG CGGAAGCCGC CTTTCTCGGC GCGGTCCTGA TCGACAACCG CATCCTCGAG
GAACTCCAGA CCCCGCTCAA GCCCGAACAC TTCTTCGCCG CCGTCCACGG CCGCGTGTTC
GAGCGCATCC AGACCCTGAT CGACCGCAAG GCCGTCGTCA CCCCGGTTAC GCTCAAGCCG
TATTTCGAAA CGGACGAGGG CCTGAAGGAG CTCGGCGGCA CCGCCTATCT CGCGCGTCTC
ACTGCCGATG GACAGGGCCT TCTCAACCCG CGCGAACTGG CCGAACAGAT CTACGATCTG
GCCCTGCTGC GCGAACTCAT CACCGTGGGC CGCAACCTCG TCGAAGGCGC GCTCGACACC
AGCGATGCGG TCGCCCCGCT CGAACAGGTC GAAAAGGCCG AAGCCGCGCT CTACGCAGTG
GCCGAAGGCG CACAGACCGG CAGCGAGGCG CAGAGCTTCG GCCAAGCCAC ACGCACCTCG
CTCGAAATGA TCGAGAAGGC ACTGCTTTCG GGCGGCCATA TCTCGGGCAA GACCACCGGC
CTCACCTCGG TCAACGAGAA GATCGGCGGC CTGCATGATT CCGACCTCAT CATCCTTGCC
GGCCGTCCAG GCATGGGCAA GACCTCGCTC GTCACCAACA TCGCGTTCAA CTCGGCCGAC
CGCCTGCGCC GCGACATGGC CGACGGCATC GCGGTCAAGG ATTCGGTCGG CGCCGCCGTC
GCCTTCTTCA GCCTTGAAAT GAGCGCGGAC CAGCTCGCCA CGCGTATTCT CGCCGAACAG
TCAGGCATCA GCTCCGAAGC GCTGCGCATG GGCCGCATCA GCCGCGAGGA TTTCCAGCAG
CTTTCCTTCG CCAGCCAGCG CCTTGCCGAA CTGCCGCTCT ACATCGACGA TACCCCCGCG
CTGACCATCG GCAGCCTTCG CGCGAGAGCG CGCAGGCTGA AGCGCCGCCA CGACATCGGG
CTTATCATCG TCGACTACCT CCAGCTCCTC CAGGGCTCGG GCCGCAGCGA CAACCGCGTC
AACGAAATCT CGGAAATCTC GCGCGGTCTC AAGACCCTGG CCAAGGAACT CTCGGTACCC
GTCATCGCGC TCTCGCAGCT CAGCCGCGCT GTCGAACAGC GCGACGACAA GCGACCGATG
CTGTCGGACC TGCGCGAATC GGGCTCGATC GAACAGGACG CCGACATGGT CTGGTTCGTC
TTCCGCGAGG ACTACTACGT CGCCGCCAAG GAGCCGAAGC AGCCCCAAGG CAACGACGAT
CCGAAGGTCC AGGAAGCCCA CGCCGCCTGG CAGGCCGAAA TGGAGCGTGT CTATGGCCTT
GCGGAACTGA TCGTCGCCAA GCAGCGCCAC GGCTCAACCG GCAAGGTCCG CCTGCGCTTC
GAGGCGCGCA TCACCCGCTT CTCCGACCTG GCCCCCGACG ACCTGCGCGC CGCCTACTCC
AGCAACGACG AGTAG
 
Protein sequence
MSASEAILTR EPSEIRALPS NVEAEAAFLG AVLIDNRILE ELQTPLKPEH FFAAVHGRVF 
ERIQTLIDRK AVVTPVTLKP YFETDEGLKE LGGTAYLARL TADGQGLLNP RELAEQIYDL
ALLRELITVG RNLVEGALDT SDAVAPLEQV EKAEAALYAV AEGAQTGSEA QSFGQATRTS
LEMIEKALLS GGHISGKTTG LTSVNEKIGG LHDSDLIILA GRPGMGKTSL VTNIAFNSAD
RLRRDMADGI AVKDSVGAAV AFFSLEMSAD QLATRILAEQ SGISSEALRM GRISREDFQQ
LSFASQRLAE LPLYIDDTPA LTIGSLRARA RRLKRRHDIG LIIVDYLQLL QGSGRSDNRV
NEISEISRGL KTLAKELSVP VIALSQLSRA VEQRDDKRPM LSDLRESGSI EQDADMVWFV
FREDYYVAAK EPKQPQGNDD PKVQEAHAAW QAEMERVYGL AELIVAKQRH GSTGKVRLRF
EARITRFSDL APDDLRAAYS SNDE