| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0118 |
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| Symbol | hemE |
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| ID | 3916004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 119850 |
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| End bp | 120875 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640442843 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_495401 |
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| Protein GI | 87198144 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGGCC CTCTTCTGAA GACGCTCCAG GGTGAGAACA TTTCCCGCCG ACCGATCTGG
CTCATGCGCC AGGCCGGACG CTATCTGCCC GAGTACCGCG AGCTTCGCGC CGAGAAGGGC
GGCTTCCTCG CGCTGGTCTA CGACACTGAC GCAGCGGCCG AAGTTACCGT GCAGCCGATC
CGTCGTTTCG GCTTCGACGG CGCGATCCTG TTTTCCGACA TCCTGATCGT ACCCTATGCG
ATGGGACAGG ATCTCCAGTT CCTCGCCGGC GAAGGTCCGC ACCTGTCACC ACGCTTGCTC
GACGCCGCGC TGAACAGCCT CGTGGCGGTG CCCGGGCGCC TCTCGCCGAT CTACGAGACG
GTTGCCAAGG TGAAGGCCCA GCTTTCGCCT GAAACCACGC TGCTCGGCTT TGCCGGCAGT
CCGTGGACGG TCGCAACCTA CATGGTGGCC GGCGAAGGCA GCCGTGACCA TCACGATACC
CGCGCGCTTG CCTATCGTGA TCCTTCGGCG TTCCAGGCAA TCATCGATGC GATTACGGAA
GTGACCATCG AGTATCTTTC GGGCCAGGTC GAAGCGGGTG CGGAAGGGCT GCAACTGTTC
GATTCTTGGT CGGGCAGCCT TGCTCCGGCC GAATTCGAAC GTTGGGTCAT CGCGCCCAAC
GCCAGGATCG CCTCCGCGAT GCAGCAGCGT TATCCCCACG TGCCTGTGAT CGGGTTCCCC
AAGGGCGCTG GCGAAAAGCT TTCCGCCTAT GCCCGCGAGA CAGGCGTCAA CGCGGTCGGC
GTGGACGAAA CCATCGATCC GTTATGGGCT GCGCGCGAAC TCCCGGCGAA CATGCCGGTA
CAGGGCAATC TCGATCCGCT TCTGCTCCTT TCGGGCGGCC CTGAGCTGGA ACGGCAGACG
ATCCGTGTTC TCGAAGCCTT TGCCGACCGC CCGCACGTCT TCAATCTTGG CCACGGCATC
GGTCAGCACA CTCCGATCGA AAACGTCGAA GCGCTTCTGA AGATCGTGCG AGGCTGGTCG
CGCTGA
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| Protein sequence | MPGPLLKTLQ GENISRRPIW LMRQAGRYLP EYRELRAEKG GFLALVYDTD AAAEVTVQPI
RRFGFDGAIL FSDILIVPYA MGQDLQFLAG EGPHLSPRLL DAALNSLVAV PGRLSPIYET
VAKVKAQLSP ETTLLGFAGS PWTVATYMVA GEGSRDHHDT RALAYRDPSA FQAIIDAITE
VTIEYLSGQV EAGAEGLQLF DSWSGSLAPA EFERWVIAPN ARIASAMQQR YPHVPVIGFP
KGAGEKLSAY ARETGVNAVG VDETIDPLWA ARELPANMPV QGNLDPLLLL SGGPELERQT
IRVLEAFADR PHVFNLGHGI GQHTPIENVE ALLKIVRGWS R
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