| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4681 |
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| Symbol | |
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| ID | 3912499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5295193 |
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| End bp | 5297307 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637886586 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_488275 |
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| Protein GI | 86751779 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0656736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCTC GTTCCGATGC CGATTGCCGG CATCATTCCG CGCGCTGCCG CGCGCTGCTG
ACATCCACCA TTCTGGCGTC CAGTCTGTTC GCGAGCGTCG CGCCGGCGTC GGCGCAGGAC
AATACGCTGC CCGCCATCAA CGTCACCGCG ACCCGCAGCT ACGAGGGCAT CGTCGGCACT
TCGAGCACGG TGATCACCGC CGACGACATC GCGCATTCGC CGGCGCAGAC CGTGCAGGAG
ATCATCGCGC AGACGCCCGG CGTGCAGACC AGGACGCTGT ATGGCGGCGT CAACGGCACC
GGCTCGTCGA TCGATCTGCG CGGCTTCGGC GCCACCGCGA CCTCGAACAC ACTGTTCCTG
GTCAACGGCC GCCGCCTCAA CGACCTCGAT CTGCAGGGCG TCGACCTGTC GAGCATCCCG
CTGCAATCGA TCGAGCGCAT CGAGATCACC CGCGGCAGCA GCGGCGCGGT GCTGTACGGC
GACAATGCGG TCGGCGGCGT CATCAATATC GTCACCAAGA CCGGCGCCGG CGGACCGCCC
GCGACGTTCC GGGCCGAAGG CGGCTTCGGC TCGTTCAACC AGCGGCTGGC ATCGATTTCC
GCGGCGTACA ATTCCGGGCC GTGGTCGACC TCGGTGTTCG CCAACGGCGT GCGCTCCAAC
GGCTATCGCG CCAACAACGC GCTGGAACAG AACAACGCGA TCGGCGAGCT GCGCTATGCC
ACGCCGGATC TCAGCGCCTT CGTCAACGTC TCCGGCGACA ATCAGCATCT CGGCCTGCCC
GGTTCCCGGA TCGTGGATCC CTCGATCGGC GTCAACCAGC TCCAGACCGA TCGCCGCGGC
ACCAACACGC CGTTCGATTT CGGCGACAAG CAGGGCGCCA ACATCACCGC CGGCTTCACC
AAATCGCTGT GGGACGGCGC CGAATTGATC GTCGACGGCG GCGTCCGCGA CAAGCGGCAG
CAGGCCGGCT ATTTCGGCAA TGTGCCGCTG TCGAGCTTCA GCGCGAGCTG GTTCGACGCA
CATCTGCAGA CCTGGTCGAT CACGCCGCGG CTGAGCATCA CCCATGCGAT GTTCGGCCTG
CCGTCGAAAA TCCTGACCGG TCTCGACTAT TACGACGCGA CCTATGATTC CGACCGCGGC
CAGTATCGCA GCACGCCGCC GGTGCACGTC TACAACCTGT CGCAGAAGAC GCTGGCCGGC
TATTGGCAGC AGACCGTCGG CATCCTGCCG ACCACCGACC TGTCCTATGG CGGCCGGCTG
CAGAGCGTCA AAGTCGAGGC CAGCGATCGG CTGAACCCGC TGGCGCCGGG CTATTTCGGC
GAAGCGCAGG CGCTGCCGCT GAGCAGCACC GAAACCCAGC ACGCGCTGCA TATCGGCCTC
GACCATCGCT TCAACGACGT GTTCAGCGTG TTCGCCCGCG CCGCGCGCGC GTTCCGCACC
CCGAATGTCG ACGAGCGGGT CTCGTCGGGA CCGTCCTACG ACGCGTTCTT CAATCCGATT
CCGGGCAACT TCGCGCTGAA GACCCAGACC TCGGTCGATT TCGAAGCCGG CTTCCGCGTC
AAATCGGGGC CGTTCGAGAT GCAGACCAGC GCCTACAACA TGAATCTCAA CAACGAGCTT
CATTACGACC CGGTCAATTT CTACAACACC AATCTCGACC CGACCCGGCG CTATGGCGGC
GAGACCAGCG CCTCGTTCCG CGTCAGCGAT ACGCTGCTGC TGCGCGGCGG CGGCGCCTAT
ACCCGCGCGA CGTTTCGCGA GGGCCCGTTC TCCGGCAACG ACGTGCCGCT GGTGTCGCGC
TATACGGCGA ATGCCGGCGT GACCTGGAAC GTCTGGCAGA AATACGTCGT GTTCGATGCG
ACCGCCCGCT ACTGGAGCAG CCGCTATATG GACAGCGACG AGAACAACCT GCAGACCAAG
ATCCCGGCGA ACGGCACGGT CGATGTCAAG CTGAGCGGCG CCTACGAGCA TTTCTTCTGG
TCGGCCAGCG TGATCAATCT GTTCAACTCG CAATATTACG ATTACGCGGT GGCGAGCAGT
TTCACGCCGG GACGCTACGG CGCCTATCCG CTGCCGGGAC GAACCTATCT CGTCAAGGCC
GGCGTGACGT TCTGA
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| Protein sequence | MPSRSDADCR HHSARCRALL TSTILASSLF ASVAPASAQD NTLPAINVTA TRSYEGIVGT
SSTVITADDI AHSPAQTVQE IIAQTPGVQT RTLYGGVNGT GSSIDLRGFG ATATSNTLFL
VNGRRLNDLD LQGVDLSSIP LQSIERIEIT RGSSGAVLYG DNAVGGVINI VTKTGAGGPP
ATFRAEGGFG SFNQRLASIS AAYNSGPWST SVFANGVRSN GYRANNALEQ NNAIGELRYA
TPDLSAFVNV SGDNQHLGLP GSRIVDPSIG VNQLQTDRRG TNTPFDFGDK QGANITAGFT
KSLWDGAELI VDGGVRDKRQ QAGYFGNVPL SSFSASWFDA HLQTWSITPR LSITHAMFGL
PSKILTGLDY YDATYDSDRG QYRSTPPVHV YNLSQKTLAG YWQQTVGILP TTDLSYGGRL
QSVKVEASDR LNPLAPGYFG EAQALPLSST ETQHALHIGL DHRFNDVFSV FARAARAFRT
PNVDERVSSG PSYDAFFNPI PGNFALKTQT SVDFEAGFRV KSGPFEMQTS AYNMNLNNEL
HYDPVNFYNT NLDPTRRYGG ETSASFRVSD TLLLRGGGAY TRATFREGPF SGNDVPLVSR
YTANAGVTWN VWQKYVVFDA TARYWSSRYM DSDENNLQTK IPANGTVDVK LSGAYEHFFW
SASVINLFNS QYYDYAVASS FTPGRYGAYP LPGRTYLVKA GVTF
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