| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4678 |
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| Symbol | |
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| ID | 3912496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5291396 |
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| End bp | 5292610 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637886583 |
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| Product | major facilitator transporter |
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| Protein accession | YP_488272 |
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| Protein GI | 86751776 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAACC TTCCGCTGCG CGACGAGAGT TCGATTCGCT ATGAAGGCTG GCGGATCGTC
GCGATGTGTT TTGCGGTCGC GACCTTCGGC TGGGCGCTCG GCTTCTACGG CCAGAGCGTC
TATCTCGCCG AGCTGACGCG GCTGCACGGC TGGCCGTCGT CGCTGATCGC GACCGCGACG
ACGTTCTTCT ATCTCGGCGG CGCGCTGCTG GTCGCCTTCG TCGGCGACGT CATCCGCGTG
ATCGGGCCGC GCGCCTGTCT GCTCGGCGGC ATCGCCGCGA TGGCGCTCGG CACCGCGCTG
CTCGGCCGGA TCGATGCGGT CTGGCAGCTC TACGCCGTCT ATGTGCTGCT CGCGGTCGGT
TGGGCCGGCA CCAGCCTCGG CGCCATCACC AGCACGCTCG GGCTGTGGTT CGACCGGCGC
CGCGGCATGG CGATCAGCCT GGCGCTGAAC GGCGCCAGCT TCGGCGGCAT CGCCGGCGTG
CCGTTGCTGG TCGCGGCGAT CGGACATTTC GGATTTGCCG ACGCGACGCT GGCGGCGGCG
ATCGCCGGGG TATTGCTGAT GCCGGTCGTC GCGATCGTCG TCGGCCGCCC GCCGCTGCGC
ATCGCGGAGC ATCCCGCCGG GCCGGGTGCG GTGCAGGCGC TGTCGTCGGG CGCGATCCGC
CGCGATGCGT TCCGCGACAT TGCGTTCCTC ACCGTCACCA TCGCGTTCGC GCTGGTGCTG
TTCGCGCAGG TCGGCTTCAT CGTGCACTTG ATCGCCTATC TCGACCCGTT GATCGGCCGC
GAGCGCGCCG CAGCCGCGGT GGCGCTGCTG ACCACGATGG CGGTGGTCGG CCGCGTCTCG
TTGTCGACCG TGATCGACCG GCTCGACCAG CGGCTGGTGT CGGCGATCTC GTTCCTGAGC
CAGGCGGTGG CGCTGGCGAT CGTGATCCTG TCGCGCGACG GCACGCTGCT ATTGATCGCC
TGTGCGCTGT TCGGCTTCTC GGTCGGCAAT CTGATCACGT TGCCGGCGCT GATCGTGCAG
CGCGAATTCC CGGCCGCCTC GTTCGGCGTC CTGATCAGCC TCGTCACCGC GATCAATCAG
GTGACCTATG CGTTCGGCCC CGGCGTGATC GGCCTCGTCC GCGACCTCTC CGGCAGTTAC
ACGCTACCGT TCGCCGGCTG CATCGTGCTG CAACTGATCG CCGCGGCGCT GGTGATGATG
CGGGGACGAA GCTGA
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| Protein sequence | MVNLPLRDES SIRYEGWRIV AMCFAVATFG WALGFYGQSV YLAELTRLHG WPSSLIATAT
TFFYLGGALL VAFVGDVIRV IGPRACLLGG IAAMALGTAL LGRIDAVWQL YAVYVLLAVG
WAGTSLGAIT STLGLWFDRR RGMAISLALN GASFGGIAGV PLLVAAIGHF GFADATLAAA
IAGVLLMPVV AIVVGRPPLR IAEHPAGPGA VQALSSGAIR RDAFRDIAFL TVTIAFALVL
FAQVGFIVHL IAYLDPLIGR ERAAAAVALL TTMAVVGRVS LSTVIDRLDQ RLVSAISFLS
QAVALAIVIL SRDGTLLLIA CALFGFSVGN LITLPALIVQ REFPAASFGV LISLVTAINQ
VTYAFGPGVI GLVRDLSGSY TLPFAGCIVL QLIAAALVMM RGRS
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